Alternatives and similar repositories for CellSeg

Users that are interested in CellSeg are comparing it to the libraries listed below

• CosmoIknosLab / NuLite
  NuLite - Lightweight and Fast Model for Nuclei Instance Segmentation and Classification
  ☆30Updated last year
• TIO-IKIM / CellViT-plus-plus
  ☆176Updated 5 months ago
• Kaiseem / PointNu-Net
  PointNu-Net Project
  ☆18Updated 2 years ago
• HKU-MedAI / HIGT
  [MICCAI'23] HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis
  ☆31Updated last year
• csccsccsccsc / cpp-net
  ☆13Updated 2 years ago
• bowang-lab / CellSeg-Transformers
  ☆15Updated last year
• aiff22 / DeepCMorph
  Histopathological Image Classification with Cell Morphology Aware Deep Neural Networks
  ☆21Updated 4 months ago
• digitalpathologybern / hover_next_inference
  Inference code for HoVer-NeXt
  ☆42Updated 2 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆55Updated 3 years ago
• Lion-shine / Segment-Membranes-and-Nuclei-from-Histopathological-Images-via-Nuclei-Point-level-Supervision
  ☆10Updated 2 years ago
• georg-wolflein / good-features
  Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"
  ☆18Updated last year
• AtlasAnalyticsLab / Vim4Path
  [CVPR 2024] Self-Supervised Vision Mamba for Histopathology Images
  ☆57Updated 5 months ago
• cvlab-stonybrook / SAMPath
  Repository for "SAM-Path: A Segment Anything Model for Semantic Segmentation in Digital Pathology" (MedAGI2023, MICCAI2023 workshop)
  ☆51Updated last year
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆69Updated last year
• MICS-Lab / s4_digital_pathology
  ☆24Updated last year
• mahmoodlab / MADELEINE
  MADELEINE: multi-stain slide representation learning (ECCV'24)
  ☆64Updated 10 months ago
• Mr-TalhaIlyas / Prerpcessing-PanNuke-Nuclei-Instance-Segmentation-Dataset
  ☆46Updated 3 years ago
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆95Updated last month
• Zhcyoung / BEPH
  BEiT-based model Pre-training on Histopathological image
  ☆68Updated 9 months ago
• TissueImageAnalytics / PanNuke-metrics
  Evaluation code for the PanNuke dataset
  ☆29Updated 5 years ago
• hthierno / pytorch-stardist
  PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes
  ☆26Updated 2 years ago
• scjjb / DRAS-MIL
  Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning
  ☆11Updated last year
• digitalpathologybern / hover_next_train
  Training/Evaluation code for HoVer-NeXt
  ☆16Updated 2 months ago
• HongLiuuuuu / WSI-SAM
  WSI-SAM
  ☆29Updated last year
• liupei101 / VLSA
  Interpretable Vision-Language Survival Analysis with Ordinal Inductive Bias for Computational Pathology (ICLR 2025)
  ☆63Updated 8 months ago
• lhaof / CGT
  Cell Graph Transformer for Nuclei Classification, AAAI 2024
  ☆26Updated last year
• TopoXLab / MCSpatNet
  Repository for ICCV2021 MCSpatNet: Multi-Class Cell Detection Using Spatial Context Representation
  ☆25Updated 2 years ago
• HistAI / hibou
  Hibou: Foundational Models for Pathology
  ☆75Updated last year
• liupei101 / PseMix
  Pseudo-Bag Mixup Augmentation for Multiple Instance Learning-Based Whole Slide Image Classification (IEEE TMI 2024)
  ☆67Updated 9 months ago
• marrlab / HistoGPT
  A vision language model for gigapixel whole slide images in histopathology
  ☆87Updated 4 months ago