iVis-at-Bilkent / pathway-mapperLinks
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
☆60Updated last year
Alternatives and similar repositories for pathway-mapper
Users that are interested in pathway-mapper are comparing it to the libraries listed below
Sorting:
- 3D hotspot mutation proximity analysis tool☆49Updated 2 years ago
- Decrypting somatic mutation patterns to reveal the evolution of cancer☆56Updated 4 years ago
- GTEx Visualizations☆65Updated 4 years ago
- Detect somatic variants from tumor and normal WGS/WXS data☆19Updated last month
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆45Updated last month
- GeneMANIA helps you predict the function of your favourite genes and gene sets.☆44Updated 2 months ago
- Identifying recurrent mutations in cancer☆39Updated 4 years ago
- Rails/Docker application for the Broad Institute's single cell RNA-seq data portal☆68Updated last week
- ARCHS4 RNA-seq processing scripts and web server pages.☆61Updated 5 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- Platform for Oncogenomic Reporting and Interpretation (PORI)☆35Updated 2 months ago
- Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.☆46Updated 7 years ago
- ☆44Updated 7 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆50Updated last year
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆29Updated 4 years ago
- ☆20Updated 8 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆31Updated last year
- Differential Count Data Analysis Toolbox☆61Updated last year
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆39Updated last week
- An interactive learning resource for next-generation sequencing (NGS) techniques☆34Updated 7 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Updated 9 years ago
- IPAW: a Nextflow workflow for proteogenomics☆28Updated last year
- A continually expanding collection of RNA-seq tools☆52Updated last month
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 5 years ago
- Project Manager for NGS data analysis☆30Updated 2 months ago