iVis-at-Bilkent / pathway-mapperLinks
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
☆60Updated last year
Alternatives and similar repositories for pathway-mapper
Users that are interested in pathway-mapper are comparing it to the libraries listed below
Sorting:
- 3D hotspot mutation proximity analysis tool☆49Updated 2 years ago
- GTEx Visualizations☆65Updated 4 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆59Updated 4 years ago
- ⚙️ A lightweight immune repertoire browser☆27Updated 5 years ago
- Identifying recurrent mutations in cancer☆39Updated 4 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- Clinical interpretation of somatic mutations in cancer☆48Updated 7 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆70Updated 4 years ago
- Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statisticall…☆38Updated 7 months ago
- ☆20Updated 8 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago
- ☆44Updated 6 years ago
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆45Updated 2 weeks ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 5 years ago
- ☆69Updated 3 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆49Updated last year
- Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data☆87Updated 5 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.☆46Updated 7 years ago
- Decrypting somatic mutation patterns to reveal the evolution of cancer☆56Updated 4 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- ☆35Updated 5 years ago
- A continually expanding collection of RNA-seq tools☆52Updated last week
- CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.☆41Updated last month
- IPAW: a Nextflow workflow for proteogenomics☆28Updated last year
- Tumour stratification by maximum-likelihood repeated evolution from multi-region sequencing data☆66Updated 2 years ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆36Updated 3 years ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- Annotation of VCF variants with functional impact and from databases (executable+library)☆63Updated this week