PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
☆62Mar 18, 2024Updated 2 years ago
Alternatives and similar repositories for pathway-mapper
Users that are interested in pathway-mapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A web based visualization tool for process description maps in SBGN☆35May 5, 2026Updated 2 months ago
- Web-service on cytoscape.js to layout graphs☆10May 13, 2021Updated 5 years ago
- Codes to regenerate figures for mutagen paper☆12Apr 8, 2021Updated 5 years ago
- Identifying recurrent mutations in cancer☆40Mar 4, 2021Updated 5 years ago
- A Cytoscape.js extension to import from and export to GraphML format☆32Mar 19, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A web application to visualize and edit pathway models☆62Updated this week
- ☆10Jan 21, 2023Updated 3 years ago
- A Cytsocape.js extension to automatically pan when nodes are out of canvas bounds☆13Sep 29, 2023Updated 2 years ago
- SyBLaRS: Systems Biology Layout & Rendering Service☆12Nov 18, 2024Updated last year
- Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data☆21Aug 19, 2020Updated 5 years ago
- Dichotomous of innate immune landscape☆17Aug 31, 2019Updated 6 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Jan 28, 2022Updated 4 years ago
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- ☆12Sep 4, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- A web application to visualize and edit the pathway models represented by SBGN Process Description Notation☆16Jun 24, 2026Updated last month
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆23Jun 18, 2021Updated 5 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Dec 23, 2023Updated 2 years ago
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆12Dec 6, 2021Updated 4 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆22Jun 22, 2026Updated last month
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- ☆17Jan 9, 2023Updated 3 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Jan 28, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R package for integrating and comparing multiple single cell genomic datasets☆12Dec 27, 2020Updated 5 years ago
- A Cytoscape.js extension to provide miscellenaous view utilities such as hiding and highlighting nodes/edges☆54Sep 9, 2025Updated 10 months ago
- ☆23Dec 25, 2017Updated 8 years ago
- BioBombe: Sequentially compressed gene expression features enhances biological signatures☆65Jul 1, 2024Updated 2 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆22Dec 14, 2021Updated 4 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆73May 23, 2024Updated 2 years ago
- RNA-Seq Mutation Detection☆28Mar 3, 2026Updated 4 months ago
- Filter and prioritize fusion calls☆20May 26, 2026Updated 2 months ago
- Install GISTIC2 by one line code; GISTIC2 docker image☆41May 5, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Framework to call Structural Variants from NGS based datasets☆22Jan 22, 2018Updated 8 years ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 5 years ago
- Explore the cancer relevance of your gene list☆55May 31, 2026Updated last month
- Somatic copy number analysis using WGS paired end wholegenome sequencing☆71Nov 20, 2020Updated 5 years ago
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆25Jun 19, 2026Updated last month
- DriverPower☆26Jan 18, 2025Updated last year
- Code to reproduce TNBC analysis and figures☆24Jun 13, 2022Updated 4 years ago