dswatson / bioplotrLinks
Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines
☆14Updated 2 years ago
Alternatives and similar repositories for bioplotr
Users that are interested in bioplotr are comparing it to the libraries listed below
Sorting:
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- A General Framework for Consensus Partitioning☆65Updated 10 months ago
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- Identify and correct invalid gene symbols☆60Updated last year
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- R package for integrating and comparing multiple single cell genomic datasets☆11Updated 5 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 5 months ago
- scDataviz: single cell dataviz and downstream analyses☆65Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆38Updated 3 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 5 months ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Toolkit for Single-Cell Velocity☆58Updated 5 months ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆42Updated 4 years ago
- An R package for visualising cell-cell interactions☆44Updated last year
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated last month
- Course Materials for Genomics Data Mining☆22Updated 3 months ago
- R package containing the Cerebro application.☆40Updated 4 years ago
- ☆27Updated 4 years ago
- ☆18Updated 3 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year