dswatson / bioplotr
Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines
☆14Updated last year
Alternatives and similar repositories for bioplotr:
Users that are interested in bioplotr are comparing it to the libraries listed below
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- Gene-level general linear mixed model☆19Updated last month
- ☆23Updated last year
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- A tidy interface for coverage analysis☆24Updated 5 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆21Updated last year
- BioCarta pathway images☆11Updated last year
- An R package to plot interactive three-way differential expression analysis☆36Updated last year
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆17Updated 3 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 3 months ago
- R package for benchmarking single cell analysis methods☆30Updated last year
- R package wrapping bedtools☆38Updated this week
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- Single-cell RNA Processing Software☆11Updated 4 months ago
- An R package for visualising cell-cell interactions☆43Updated 6 months ago
- Automatic selection of number of principal components☆15Updated 2 years ago
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- Read HOMER motif analysis output in R.☆15Updated 6 years ago
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- R package for Flexible dot plots☆29Updated 2 years ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated last year
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 2 months ago
- ☆12Updated 9 months ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- A General Framework for Consensus Partitioning☆61Updated 2 weeks ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago