Alternatives and similar repositories for FCA_liver:

Users that are interested in FCA_liver are comparing it to the libraries listed below

• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆26Updated 2 years ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆29Updated 3 years ago
• Coolgenome / iTALK
  ☆59Updated 5 years ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆42Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆47Updated last year
• buenrostrolab / FigR
  Functional Inference of Gene Regulation
  ☆40Updated 7 months ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆59Updated 4 months ago
• powellgenomicslab / DropletQC
  Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data
  ☆35Updated 3 years ago
• scCOVID-19 / COVIDPBMC
  Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection
  ☆40Updated 3 years ago
• CFeregrino / scWGCNA
  scWGCNA
  ☆56Updated 2 years ago
• califano-lab / single-cell-pipeline
  ☆44Updated 5 years ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆23Updated 3 years ago
• KlugerLab / DAseq
  ☆39Updated 3 years ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆32Updated 4 years ago
• Japrin / sscClust
  simpler single cell RNAseq data clustering
  ☆40Updated 8 months ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆44Updated 4 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆31Updated 2 months ago
• UPSUTER / GEMLI
  ☆29Updated 3 weeks ago
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆32Updated last year
• veltenlab / CloneTracer
  This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…
  ☆25Updated 4 months ago
• satijalab / Integration2019
  ☆16Updated 5 years ago
• JiaqiLiZju / CelltypeEvolution
  Code used in article: Tracing cell-type evolution by cross-species comparison of cell atlases
  ☆18Updated 4 years ago
• ThomasJamesMitchell / deSCeRNAMut
  Method for de novo mutation calling from droplet based single cell RNA seq data
  ☆12Updated 3 years ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆14Updated last year
• elimereu / matchSCore2
  ☆53Updated 4 years ago
• MSZaki / Aging-and-CR-rat-atlas
  Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…
  ☆28Updated 5 years ago
• mahmoudibrahim / genesorteR
  Feature Ranking in (possibly large) Clustered Single Cell Data
  ☆40Updated 3 years ago
• EDePasquale / DoubletDecon
  A tool for removing doublets from single-cell RNA-seq data
  ☆71Updated 4 years ago
• HectorRDB / condiments
  Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression
  ☆26Updated 2 months ago