lulab / shared_scripts
shared scripts in Lu Lab @ Tsinghua University
☆10Updated 6 years ago
Alternatives and similar repositories for shared_scripts
Users that are interested in shared_scripts are comparing it to the libraries listed below
Sorting:
- Readme☆10Updated 5 years ago
- ☆11Updated 4 years ago
- lncRNA分析流程☆8Updated 6 years ago
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 3 years ago
- RNA-seq analysis scripts☆15Updated 2 weeks ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Updated 4 years ago
- Data visualization with R☆11Updated 4 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆19Updated 6 years ago
- ☆12Updated 4 years ago
- a bucket of bioinformatics scripts☆13Updated this week
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆23Updated 2 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 4 years ago
- ☆12Updated 2 years ago
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Updated 4 years ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆13Updated last year
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Updated last year
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- lncRNA-screen☆25Updated 8 years ago
- scripts used for processing and analyzing data in the article.☆13Updated 5 years ago
- ☆13Updated 2 years ago
- TWAS-pipeline☆22Updated 4 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated this week
- GWAS analysis process based on EMMAX software☆11Updated last year
- General Use Scripts and Helper functions☆16Updated 7 years ago
- The cattle Genotype-Tissue Expression atlas v1☆24Updated 2 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 5 years ago
- My own tools code for NGS data analysis (Next Generation Sequencing)☆30Updated 5 years ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- RNAseq analysis with Hisat2, stringtie, and ballgown☆16Updated 5 years ago
- ☆19Updated 9 months ago