Alternatives and similar repositories for debrowser

Users that are interested in debrowser are comparing it to the libraries listed below

• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated last week
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated last year
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• gtrichard / deepStats
  deepStats: a stastitical toolbox for deeptools and genomic signals
  ☆35Updated 4 years ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆79Updated 2 months ago
• YuLab-SMU / ReactomePA
  Reactome Pathway Analysis
  ☆44Updated last month
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆32Updated 10 months ago
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆35Updated 2 months ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆79Updated 9 months ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆67Updated last year
• PhanstielLab / Sushi
  Tools for visualizing genomics data
  ☆69Updated 4 years ago
• andrewparkermorgan / argyle
  An R package for import, QC and analysis of Illumina Infinium genotyping arrays
  ☆35Updated 7 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆54Updated last month
• kdkorthauer / dmrseq
  R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
  ☆62Updated 9 months ago
• mikelove / deseq2_or_edger
  DESeq2 or edgeR
  ☆22Updated 9 years ago
• simonvh / fluff
  Fluff is a Python package that contains several scripts to produce pretty, publication-quality figures for next-generation sequencing exp…
  ☆71Updated last year
• JEFworks / liger
  Lightweight Iterative Gene set Enrichment in R
  ☆58Updated last year
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆40Updated last month
• Danko-Lab / rtfbs_db
  Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.
  ☆23Updated 7 years ago
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆21Updated 2 months ago
• Shians / Glimma
  Glimma R package
  ☆50Updated last year
• alserglab / phantasus
  Visual exploratory analysis of gene expression data
  ☆45Updated 3 months ago
• nsheff / LOLA
  Locus Overlap Analysis: Enrichment of Genomic Ranges
  ☆79Updated 5 years ago
• gagneurlab / OUTRIDER
  OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data
  ☆56Updated last week
• cougarlj / COMPSRA
  COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis
  ☆17Updated 5 years ago
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆31Updated last year
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆97Updated last week
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆29Updated 2 years ago
• SamBuckberry / RUN-WGCNA
  Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
  ☆30Updated 10 years ago