Alternatives and similar repositories for dlprb:

Users that are interested in dlprb are comparing it to the libraries listed below

• xypan1232 / iDeep
  iDeep: integrated prediction of RNA-protein binding sites using deep learning
  ☆39Updated 4 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆35Updated 2 years ago
• ma-compbio / PEP
  ☆14Updated 4 years ago
• IdoSpringer / ERGO
  ERGO is a deep learing based model for predicting TCR-peptide binding.
  ☆17Updated 2 years ago
• arefeen / DeepPASTA
  ☆10Updated 4 years ago
• mhorlacher / rbpnet
  ☆18Updated last year
• jianlin-cheng / DeepGRN
  Deep learning for modeling gene regulatory network
  ☆22Updated 3 years ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆36Updated 2 years ago
• zhangyan32 / HiCPlus
  ☆31Updated 5 years ago
• jpiper / pyDNase
  Python module for the easy handling and analysis of DNase-seq data
  ☆37Updated 5 years ago
• p-koo / learning_sequence_motifs
  "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy
  ☆33Updated 5 years ago
• dmaticzka / GraphProt
  GraphProt: modelling binding preferences of RNA-binding proteins
  ☆20Updated 6 years ago
• vagarwal87 / saluki_paper
  Saluki, a method to predict mRNA half-lives from sequence
  ☆23Updated 2 years ago
• matsengrp / vampire
  🧛 Deep generative models for TCR sequences 🧛
  ☆17Updated 3 years ago
• GuipengLi / SharePathway
  a python package for KEGG pathway enrichment analysis with multiple gene lists.
  ☆36Updated 7 years ago
• FunctionLab / sei-manuscript
  Code for reproducing the Sei manuscript results
  ☆16Updated 3 years ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 6 years ago
• csoneson / NativeRNAseqComplexTranscriptome
  Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"
  ☆19Updated 5 years ago
• hendrixlab / mRNN
  mRNN is an implementation of a Gated Recurrent Unit (GRU) network for classification of transcripts as either coding or noncoding.
  ☆20Updated 6 years ago
• ma-compbio / CTCF-MP
  ☆11Updated 4 years ago
• gifford-lab / CpGenie
  ☆11Updated 6 years ago
• kundajelab / bpnet-manuscript
  BPNet manuscript code.
  ☆11Updated 4 years ago
• uci-cbcl / FactorNet
  A deep learning package for predicting TF binding
  ☆42Updated 5 years ago
• pjsample / human_5utr_modeling
  Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.
  ☆45Updated 5 years ago
• kundajelab / ChromDragoNN
  Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…
  ☆44Updated 3 years ago
• varnivey / ipanda
  insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…
  ☆25Updated 8 years ago
• huangwenze / PrismNet_analysis
  the analysis script for PrismNet
  ☆10Updated 4 years ago
• maxwellsh / DIGDriver
  Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.
  ☆25Updated 2 years ago
• ohlerlab / DeepRiPe
  ☆24Updated last year
• weng-lab / BENGI
  ☆18Updated 2 years ago