biagent-dev / bia
BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow
☆18Updated last month
Related projects: ⓘ
- Interactive tutorials for using scikit-bio in biological research☆13Updated 2 months ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated 11 months ago
- ☆13Updated 2 months ago
- ☆18Updated last year
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆20Updated last year
- Listing of GPU based bioinformatics software & sites & publications☆10Updated 2 years ago
- An RNA virus strain-level identification tool for short reads.☆19Updated 3 months ago
- Network Visualization using both GUI and Programming☆27Updated 3 months ago
- Detecting Sequence Signals in Targeting Peptides Using Deep Learning☆12Updated 5 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆12Updated 2 months ago
- Annotating principal splice isoforms☆14Updated this week
- A method to predict DNA shape features considering farther flanking region.☆15Updated 5 months ago
- FunctionaL Omics Processing platform☆13Updated last month
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆19Updated last year
- A manually curated database of human gut metabolic modules.☆17Updated 6 years ago
- Nanopore Real-Time Analysis Tool☆13Updated 2 weeks ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆20Updated 3 weeks ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆30Updated 4 months ago
- EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses☆9Updated 3 months ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆25Updated last year
- Metagenome analysis using the Kraken software suite☆27Updated last year
- Bayesian enrichment estimation in R☆9Updated 2 years ago
- PiGx SARS-CoV-2 wastewater sequencing pipeline☆18Updated last year
- ☆15Updated 5 months ago
- ☆19Updated this week
- k-mer similarity analysis pipeline☆19Updated last year
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆10Updated 3 years ago
- Nanopore UMI-linked consensus sequencing☆12Updated 3 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆8Updated 6 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆11Updated last year