wyguo / ThreeDRNAseqLinks
A pipeline for differential expression and differential alternative splicing analysis
☆67Updated last year
Alternatives and similar repositories for ThreeDRNAseq
Users that are interested in ThreeDRNAseq are comparing it to the libraries listed below
Sorting:
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- An R interface to the MEME Suite☆50Updated last month
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- An interactive web-tool for RNA-seq analysis☆68Updated 4 months ago
- An efficient way to guess the library type of your RNA-Seq data.☆31Updated 2 years ago
- R package for genomic feature analysis and visualization☆79Updated 3 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Tools for analyzing DNA methylation data☆42Updated last week
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 8 years ago
- ☆50Updated 4 years ago
- ☆29Updated 5 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆42Updated last week
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆115Updated 5 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 5 months ago
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆86Updated 5 months ago
- R package for inferring copy number from read depth☆32Updated 2 years ago
- Motif manipulation functions for R.☆30Updated 2 months ago
- ☆33Updated 2 weeks ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- ☆72Updated 3 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- csf fork of fastqc for usage on selected reads of unaligned bam file☆49Updated 12 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- Reduce + Visualize Gene Ontology☆30Updated 2 months ago