Alternatives and similar repositories for degust:

Users that are interested in degust are comparing it to the libraries listed below

• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆27Updated last week
• NBISweden / GUESSmyLT
  An efficient way to guess the library type of your RNA-Seq data.
  ☆31Updated 2 years ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆50Updated 6 months ago
• dariober / bioinformatics-cafe
  Unsorted scripts for bioinformatics
  ☆60Updated 3 years ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆76Updated 3 weeks ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• snakemake-workflows / rna-seq-kallisto-sleuth
  A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
  ☆68Updated this week
• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆53Updated 4 years ago
• kvittingseerup / IsoformSwitchAnalyzeR
  An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)
  ☆112Updated 3 months ago
• RamRS / biostar-mod-templates
  Moderator Templates for https://www.biostars.org/
  ☆11Updated 4 years ago
• hbctraining / main
  ☆53Updated this week
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• williamritchie / IRFinder
  Detecting intron retention from RNA-Seq experiments
  ☆55Updated 9 months ago
• hbctraining / Intro-to-rnaseq-hpc-salmon
  ☆49Updated 4 years ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 6 years ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆67Updated last year
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆30Updated last year
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆68Updated 3 months ago
• SciLifeLab / NGI-RNAseq
  Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
  ☆51Updated 6 years ago
• hbctraining / Intro-to-variant-analysis
  ☆31Updated this week
• nf-core / airrflow
  B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
  ☆60Updated this week
• Nik-Zainal-Group / signature.tools.lib
  R package containing useful functions for mutational signature analysis
  ☆81Updated last week
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆56Updated last year
• jwfoley / bioanalyzeR
  R tools for Agilent electrophoresis data
  ☆45Updated last year
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• bartongroup / RATS
  Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
  ☆34Updated 2 years ago
• vastgroup / vast-tools
  A toolset for profiling alternative splicing events in RNA-Seq data.
  ☆81Updated 3 months ago
• IARCbioinfo / BAM-tricks
  Tip and tricks for BAM files
  ☆85Updated 6 years ago
• alserglab / phantasus
  Visual exploratory analysis of gene expression data
  ☆43Updated 2 months ago