gexijin / shinygoLinks
☆31Updated last month
Alternatives and similar repositories for shinygo
Users that are interested in shinygo are comparing it to the libraries listed below
Sorting:
- ☆58Updated 3 years ago
- SingleCell Nanopore sequencing data analysis☆60Updated last month
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆38Updated 5 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆93Updated last month
- A Python library to visualize and analyze long-read transcriptomes☆62Updated 2 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆42Updated last week
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆46Updated 3 months ago
- ☆50Updated 4 years ago
- ☆11Updated last week
- Demultiplexes a fastq.☆45Updated 4 years ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆77Updated 3 years ago
- Tools for analyzing DNA methylation data☆42Updated last week
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 9 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆54Updated last month
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆61Updated 9 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 5 months ago
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- Tip and tricks for BAM files☆85Updated 6 years ago
- ☆61Updated 11 months ago
- Quantification of transposable element expression using RNA-seq☆71Updated last year
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆43Updated last month
- Long-read Isoform Quantification and Analysis☆38Updated 3 months ago
- ENCODE long read RNA-seq pipeline☆49Updated 2 years ago
- An R interface to the MEME Suite☆50Updated last month
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆72Updated 3 weeks ago