yuhanH / HPViewerLinks
☆15Updated 7 years ago
Alternatives and similar repositories for HPViewer
Users that are interested in HPViewer are comparing it to the libraries listed below
Sorting:
- Long read to rMATS☆32Updated 2 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 11 months ago
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- ☆51Updated 6 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated last month
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated 4 months ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- fastx-utils using klib☆20Updated 5 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated 2 weeks ago
- ☆20Updated 3 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆30Updated last year
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 7 months ago
- ☆21Updated last year
- Evolutionary Transcriptomics with R☆45Updated this week
- ☆35Updated last year
- ☆17Updated last month
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆29Updated 4 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆43Updated 3 months ago
- ☆25Updated last year
- IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split …☆16Updated 2 years ago
- ☆38Updated 2 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆53Updated last week
- ☆11Updated 3 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool☆22Updated 2 years ago