srbehera / DRAGEN_AnalysisLinks
☆34Updated last year
Alternatives and similar repositories for DRAGEN_Analysis
Users that are interested in DRAGEN_Analysis are comparing it to the libraries listed below
Sorting:
- ☆36Updated 2 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 5 months ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆30Updated last month
- Structural variant merging tool☆53Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last month
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆35Updated 6 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆14Updated last year
- Simple library/pipeline to generate and handle Hi-C data.☆38Updated 9 months ago
- ☆51Updated 6 years ago
- Long read to rMATS☆32Updated 2 years ago
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆63Updated 2 weeks ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆49Updated last week
- new repo☆28Updated 4 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆25Updated 3 months ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 10 months ago
- An insertion caller for Illumina paired-end WGS data.☆23Updated this week
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆40Updated last year
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆57Updated 7 months ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 11 months ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆32Updated last month
- GENE-SWitCH project RNA-Seq analysis pipeline☆28Updated 6 months ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Updated 2 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆23Updated 2 years ago
- ☆19Updated 2 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆37Updated last year
- Long-read splice alignment with high accuracy☆64Updated 11 months ago
- ☆29Updated 4 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- ☆23Updated 8 months ago
- processing 10x genomics reads☆26Updated 5 years ago