Central repository for biomolecular foundation models with shared trainers and pipeline components
☆843Jun 7, 2026Updated last week
Alternatives and similar repositories for foundry
Users that are interested in foundry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A generalized computational framework for biomolecular modeling.☆424Jun 5, 2026Updated last week
- User friendly and accurate binder design pipeline☆1,123May 11, 2026Updated last month
- ☆253Feb 12, 2026Updated 4 months ago
- Inference code for RFdiffusion2☆426Apr 3, 2026Updated 2 months ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆581Feb 6, 2025Updated last year
- ☆150Jul 16, 2025Updated 10 months ago
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,934May 6, 2026Updated last month
- Code for the ProteinMPNN paper☆1,751Aug 14, 2024Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆128Oct 24, 2025Updated 7 months ago
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆311Apr 24, 2026Updated last month
- ☆809May 18, 2026Updated 3 weeks ago
- Making Protein Design accessible to all via Google Colab!☆915Apr 6, 2026Updated 2 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆264Jul 24, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆406Aug 7, 2024Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆140Nov 11, 2025Updated 7 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆80Updated this week
- Code for running RFdiffusion☆2,906Apr 24, 2026Updated last month
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆33Mar 22, 2026Updated 2 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆832Updated this week
- Official repository for the Boltz biomolecular interaction models☆4,021May 29, 2026Updated 2 weeks ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 11 months ago
- Official repository of PXDesign☆228Dec 31, 2025Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆370May 22, 2026Updated 3 weeks ago
- ☆503Mar 5, 2026Updated 3 months ago
- BoltzGen: Toward Universal Binder Design☆976May 28, 2026Updated 2 weeks ago
- Protein hallucination and inpainting with RoseTTAFold☆282Mar 30, 2023Updated 3 years ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 9 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆255Nov 5, 2025Updated 7 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆91Dec 3, 2025Updated 6 months ago
- List of computational protein design research labs☆240Feb 9, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Implementation for SE(3) diffusion model with application to protein backbone generation☆421Jul 3, 2023Updated 2 years ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆127Jan 28, 2026Updated 4 months ago
- Chai-1, SOTA model for biomolecular structure prediction☆1,946Apr 11, 2026Updated 2 months ago
- ☆212Apr 21, 2025Updated last year
- ☆60May 29, 2025Updated last year
- A generative model for programmable protein design☆820Apr 11, 2024Updated 2 years ago
- Official repository of GENzyme☆64Nov 29, 2024Updated last year