RosettaCommons / atomworksLinks
A generalized computational framework for biomolecular modeling.
☆377Updated last week
Alternatives and similar repositories for atomworks
Users that are interested in atomworks are comparing it to the libraries listed below
Sorting:
- Diffusion-based all-atom protein generative model.☆228Updated 4 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆226Updated 5 months ago
- Inference code for RFdiffusion2☆369Updated last month
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆146Updated 8 months ago
- Protein-ligand structure prediction☆235Updated 4 months ago
- ☆741Updated last week
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆142Updated last year
- ☆230Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆214Updated 4 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆159Updated 4 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆225Updated last year
- Protein Ligand INteraction Dataset and Evaluation Resource☆267Updated 3 weeks ago
- Comprehensive benchmarking of protein-ligand structure prediction methods. (ICML 2024 AI4Science)☆181Updated last month
- ☆205Updated 8 months ago
- ☆132Updated 6 months ago
- composite-objective protein design☆127Updated 2 weeks ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆181Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆315Updated 2 months ago
- Plugin for folding sequences directly in PyMOL☆112Updated 4 months ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆183Updated last year
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆178Updated last month
- Improved antibody structure-based design using inverse folding☆147Updated 2 weeks ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆269Updated last year
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆217Updated last month
- List of computational protein design research labs☆218Updated 10 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆115Updated 7 months ago
- ☆144Updated 5 months ago
- Dataset and package for working with protein-protein interactions in 3D☆99Updated 7 months ago
- Masif seed paper repository☆168Updated 3 months ago
- Generative Language Modeling for Antibody Design☆175Updated last year