The-Institute-for-AI-Molecular-Design / ODesignLinks
Official repository of "ODesign: A World Model for Biomolecular Interaction Design"
☆61Updated last week
Alternatives and similar repositories for ODesign
Users that are interested in ODesign are comparing it to the libraries listed below
Sorting:
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆78Updated 3 months ago
- ☆75Updated 9 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- Calculate the RMSD between two antibody structure (including nanobody and antibody).☆11Updated 2 years ago
- Baseline model for PPB-Affinity benchmark data☆33Updated 6 months ago
- Code for humanization of antibody and nanobody☆65Updated 3 months ago
- ☆27Updated last year
- workflow used to prepare PPB-Affinity database☆28Updated last year
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆34Updated 2 years ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆25Updated last year
- A Multi-modal System for Automated Mining of Protein-Ligand Bioactivity Data from Literature☆63Updated 5 months ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated last year
- Official repository of ReactZyme☆37Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 6 months ago
- Official repository of GENzyme☆58Updated last year
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆46Updated last year
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 8 months ago
- ☆25Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated last month
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆89Updated 5 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 6 months ago
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆44Updated last month
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆84Updated 2 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Updated 2 years ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆66Updated 9 months ago
- ☆39Updated last year
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- ☆61Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆84Updated last year