HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structures by leveraging the forward pass of a structure prediction model
☆95Oct 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for HalluDesign
Users that are interested in HalluDesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a lightweight distogram-prediction model trained via contrastive learning☆16May 3, 2026Updated 5 months ago
- ☆261Sep 22, 2026Updated last month
- de novo design of high affinity biological binders☆204Sep 1, 2026Updated 2 months ago
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆352Jul 1, 2026Updated 4 months ago
- Official repository of PXDesign☆272Dec 31, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆465Oct 22, 2026Updated last week
- Official Implementation of IgGM☆237May 28, 2026Updated 5 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 9 months ago
- Inference code for RFdiffusion2☆454Oct 22, 2026Updated last week
- Biomolecular co-folding, binder filtering, and nanobody design☆93Jun 28, 2026Updated 4 months ago
- ☆646Feb 6, 2025Updated last year
- Codes for our paper "Programming Biomolecular Interactions with All-Atom Generative Model"☆110Jun 6, 2026Updated 4 months ago
- ☆546Oct 22, 2026Updated last week
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆140Oct 12, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- User friendly and accurate binder design pipeline☆1,261Sep 21, 2026Updated last month
- ☆192Jul 24, 2026Updated 3 months ago
- An Open-source Drug Discovery Engine☆524Oct 8, 2026Updated 3 weeks ago
- ☆149Jun 16, 2026Updated 4 months ago
- OVO, an open-source ecosystem for de novo protein design☆143Oct 25, 2026Updated last week
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆281Jul 24, 2025Updated last year
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆313Sep 23, 2025Updated last year
- ☆103Jul 24, 2026Updated 3 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆334Oct 28, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆96Sep 4, 2026Updated last month
- A Unified Evaluation Suite for Protein Design☆141Jan 27, 2026Updated 9 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆96Jul 31, 2026Updated 3 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆135Oct 24, 2025Updated last year
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆1,038Oct 22, 2026Updated last week
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆151Oct 21, 2026Updated last week
- ☆144Jun 3, 2025Updated last year
- Generative biopolymer design with rich conditioning.☆524Updated this week
- a universal molecular interaction modeling platform based on AlphaFold3, supporting structure prediction and analysis for various recepto…☆52Nov 20, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Potts model-based protein sequence design☆120Jul 1, 2026Updated 4 months ago
- ☆420Aug 7, 2024Updated 2 years ago
- Latents-based conformational control in OpenFold3.☆82May 25, 2026Updated 5 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆177Oct 11, 2023Updated 3 years ago
- Public RFDiffusionAA repo☆492Jul 9, 2024Updated 2 years ago
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆96Jun 1, 2026Updated 5 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆269Nov 5, 2025Updated 11 months ago