Toward High-Accuracy Open-Source Biomolecular Structure Prediction.
☆1,853Apr 23, 2026Updated last week
Alternatives and similar repositories for Protenix
Users that are interested in Protenix are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Chai-1, SOTA model for biomolecular structure prediction☆1,929Apr 11, 2026Updated 3 weeks ago
- Official repository for the Boltz biomolecular interaction models☆3,941Mar 29, 2026Updated last month
- ☆802May 27, 2025Updated 11 months ago
- ☆2,318Mar 19, 2026Updated last month
- AlphaFold 3 inference pipeline.☆7,907Apr 23, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An accurate and trainable end-to-end protein-ligand docking framework☆131Mar 24, 2025Updated last year
- Implementation of Alphafold 3 from Google Deepmind in Pytorch☆1,655Sep 18, 2025Updated 7 months ago
- Public RFDiffusionAA repo☆480Jul 9, 2024Updated last year
- User friendly and accurate binder design pipeline☆1,086Apr 17, 2026Updated 2 weeks ago
- Making Protein Design accessible to all via Google Colab!☆909Apr 6, 2026Updated 3 weeks ago
- List of papers about Proteins Design using Deep Learning☆1,923Apr 25, 2026Updated last week
- Diffusion-based all-atom protein generative model.☆235Aug 27, 2025Updated 8 months ago
- Code for running RFdiffusion☆2,849Apr 24, 2026Updated last week
- Code for the ProteinMPNN paper☆1,713Aug 14, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆525Mar 22, 2026Updated last month
- ☆571Feb 6, 2025Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆329Oct 6, 2025Updated 6 months ago
- A generative model for programmable protein design☆813Apr 11, 2024Updated 2 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆419Jul 3, 2023Updated 2 years ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆252Jul 24, 2025Updated 9 months ago
- AI-powered ab initio biomolecular dynamics simulation☆574Feb 18, 2025Updated last year
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,347Dec 16, 2025Updated 4 months ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,226Mar 10, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Protein-ligand structure prediction☆240Jul 31, 2025Updated 9 months ago
- Making Protein folding accessible to all!☆2,737Mar 17, 2026Updated last month
- Fast protein backbone generation with SE(3) flow matching.☆324Jul 19, 2024Updated last year
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,502May 2, 2025Updated last year
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆796Apr 26, 2026Updated last week
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆297Dec 23, 2025Updated 4 months ago
- ☆137Jun 3, 2025Updated 11 months ago
- ☆247Feb 12, 2026Updated 2 months ago
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,059Feb 7, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆805Apr 20, 2026Updated 2 weeks ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- ColabFold on your local PC☆850Apr 21, 2026Updated last week
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆191Jun 24, 2024Updated last year
- ☆118Jan 3, 2026Updated 4 months ago
- ☆402Aug 7, 2024Updated last year
- ☆212Apr 21, 2025Updated last year