PitchInteractiveInc / PhinchLinks
Phinch is an open-source framework for visualizing biological data, funded by a grant from the Alfred P. Sloan foundation. This project represents an interdisciplinary collaboration between Pitch Interactive, a data visualization studio in Oakland, CA, and biological researchers at UC Riverside.
☆150Updated 3 years ago
Alternatives and similar repositories for Phinch
Users that are interested in Phinch are comparing it to the libraries listed below
Sorting:
- Emperor a tool for the analysis and visualization of large microbial ecology datasets☆55Updated last year
- SVG based genome viewer written in javascript using D3☆33Updated 9 years ago
- Deprecated : Use https://github.com/drpowell/degust☆44Updated 8 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆74Updated last week
- Phinch is a data visualization framework aimed at promoting novel explorations of large biological datasets (microbiomes, metagenomes, et…☆40Updated last year
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Indexing & querying large assembly graphs -- in space, no one can hear you miao!☆117Updated last year
- SVG based genome viewer written in javascript using D3☆67Updated 7 years ago
- Recipes for bioinformatics analyses with scikit-bio☆42Updated 9 years ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 6 years ago
- Reproducible Phylogenomics☆22Updated 8 years ago
- Horizon chart js library for DNA data.☆62Updated 9 years ago
- Interactive tools for metagenome visualization and binning in R☆28Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- ☆19Updated 9 years ago
- Clustering phylogenetic trees with python☆25Updated 10 months ago
- Pipelines to do MinION sequencing of Zika virus☆15Updated 5 years ago
- Nozzle is a report generation toolkit for data analysis pipelines implemented in R.☆68Updated 9 years ago
- creating hybrid-gene phylogenetic trees for diversity analyses☆30Updated 2 years ago
- just annotate it, dammit!☆93Updated last year
- Genomics Research Container Architecture☆48Updated 5 years ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 5 years ago
- Bring Your Own Bioinformatics☆27Updated 9 years ago
- A collection of well-known bioinformatics programs.☆25Updated 10 years ago
- Public Health England SNP calling pipeline.☆36Updated 6 years ago
- Mitochondrial Solar Plot☆25Updated 8 years ago
- Materials for Analyzing Next-Generation Sequencing (ANGUS) course.☆107Updated 2 years ago
- A new web-based HTML5 genome browser. Genome Maps can also browse BAM and VCFs files among other formats.☆27Updated 11 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated 3 weeks ago
- Efficient handling of FASTQ files from Python☆51Updated last month