mattloose / RUscriptsLinks
Scripts for implementing read until and other examples.
☆31Updated 5 years ago
Alternatives and similar repositories for RUscripts
Users that are interested in RUscripts are comparing it to the libraries listed below
Sorting:
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- REINDEER REad Index for abuNDancE quERy☆56Updated 7 months ago
- Tools and software library developed by the ONT Applications group☆64Updated 5 years ago
- Using kallisto for metagenomic analysis☆49Updated 9 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆59Updated 4 months ago
- UCSC Nanopore☆44Updated 6 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆49Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Updated 6 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 7 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 5 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Estimating k-mer coverage histogram of genomics data☆77Updated 2 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆26Updated 7 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆52Updated 7 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆36Updated 2 years ago
- 10x Genomics Reads Simulator☆46Updated 2 years ago
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Amplicon Sequencing Analysis Pipeline☆18Updated 4 months ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- Pan-Genomic Matching Statistics☆55Updated last year
- Reference-free variant discovery in large eukaryotic genomes☆42Updated 4 years ago
- Code for nanopore paper☆33Updated 10 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 7 years ago