mattloose / RUscriptsLinks
Scripts for implementing read until and other examples.
☆31Updated 5 years ago
Alternatives and similar repositories for RUscripts
Users that are interested in RUscripts are comparing it to the libraries listed below
Sorting:
- Analysis tool for Nanopore sequencing data☆33Updated 6 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆31Updated last year
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 7 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆48Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 7 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆56Updated last year
- Antibiotic resistance predictions in minutes on a laptop☆50Updated 6 years ago
- UCSC Nanopore☆43Updated 5 years ago
- 10x Genomics Reads Simulator☆45Updated last year
- High-performance error correction for Illumina resequencing data☆72Updated 9 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 4 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 7 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆35Updated 2 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆57Updated 3 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Ultra-efficient taxonomic mapping of NGS data☆52Updated 4 years ago
- ☆31Updated last year
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- A versatile toolkit for k-mers with taxonomic information☆78Updated 11 months ago
- Pan-Genomic Matching Statistics☆52Updated last year
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆32Updated 2 years ago