trytoolchest / lug
Run Python functions locally or in the cloud. Built for computational science.
☆22Updated last year
Related projects ⓘ
Alternatives and complementary repositories for lug
- repository-based plasmid design☆28Updated last year
- Parsing MHC nomenclature in the wild☆16Updated last month
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Toolchest Python client☆15Updated last year
- Exercises for training scientists to perform some RNA-seq analyses.☆11Updated 5 years ago
- Light-weight Jupyter notebook tracker.☆34Updated last month
- Polygenic score calculation from VCF in Nim.☆15Updated 4 years ago
- Image and VM management for Jenkins, Spark and Mesos clusters in EC2☆22Updated 4 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 2 weeks ago
- (Deprecated) Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproje…☆11Updated 2 weeks ago
- Creates Random Coding Sequences with specified GC content and Amino Acid usage☆9Updated 2 years ago
- A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)☆25Updated 3 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11Updated 7 years ago
- bioinformatics visualization tools with pyviz/bokeh☆19Updated last year
- A fast dataloader for bigwig files made for machine learning☆24Updated last month
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆21Updated 3 weeks ago
- a python library for working with flow cytometry data.☆14Updated 9 years ago
- Freelance bioinformaticians directory☆9Updated last year
- 📈 DNA Sequence Visualization for Humans☆40Updated 3 years ago
- ☆15Updated 4 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆21Updated this week
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated last year
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆16Updated last year
- AI agents + toolkits for scientific knowledge☆23Updated 2 months ago
- A package for creating and managing sample identifiers in comparative -omics datasets.☆23Updated 7 years ago
- Meta-Storms 2 is the standalone implementation of the Microbiome Search Engine (MSE; http://mse.ac.cn). This is the official software re…☆10Updated 4 years ago
- CPU and GPU deterministic and therefore fully reproducible machine learning pipelines using MLflow.☆46Updated last year