brentp / biglyLinks
a pileup library that embraces the huge
☆43Updated 5 years ago
Alternatives and similar repositories for bigly
Users that are interested in bigly are comparing it to the libraries listed below
Sorting:
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆33Updated 2 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆35Updated 2 years ago
- 10x Genomics Reads Simulator☆45Updated last year
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 9 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- A tool to benchmark mappers and different parameters within minutes☆44Updated 6 years ago
- sort genomic data☆36Updated 5 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- Structural variant (SV) analysis tools☆38Updated last year
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆57Updated 3 weeks ago
- ☆31Updated 3 years ago
- Population-wide Deletion Calling☆35Updated 5 months ago
- UCSC Nanopore☆43Updated 6 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Updated 3 years ago
- my PhD thesis☆36Updated 6 years ago
- Tools for bam file processing☆55Updated 10 years ago
- Detect novel (and reference) STR expansions from short-read data☆67Updated 2 years ago
- Structural Variant Index☆75Updated 9 months ago
- Browser based application for viewing bam alignments☆56Updated 8 years ago