a pileup library that embraces the huge
☆43Oct 2, 2020Updated 6 years ago
Alternatives and similar repositories for bigly
Users that are interested in bigly are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- sort genomic data☆36Oct 21, 2026Updated last week
- Stupid Simple Structural Variant View☆26Nov 21, 2016Updated 9 years ago
- ☆13Sep 11, 2025Updated last year
- localised duplicate detection on patterned flow cells☆10Feb 27, 2019Updated 7 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 8 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- vembrane filters, sorts, and transforms VCF records using python expressions☆71Updated this week
- Minimalistic aligner which uses Minimap for input mapping locations and Edlib for fast bitvector alignment.☆10Jul 16, 2017Updated 9 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆59Feb 17, 2022Updated 4 years ago
- Scaffolding with assembly likelihood optimization☆21Dec 14, 2020Updated 5 years ago
- A method to identify structural variation from sequencing data in target regions☆32Sep 23, 2020Updated 6 years ago
- What's The Function of these genes?☆22Mar 17, 2017Updated 9 years ago
- ☆11Apr 3, 2023Updated 3 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆404Jun 16, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- Hidden Markov Model based Copy number caller☆20Jul 18, 2026Updated 3 months ago
- genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF☆153Feb 17, 2026Updated 8 months ago
- Pan gGnome Viewer☆10Sep 24, 2026Updated last month
- Kmer based genotyper for short reads.☆23Oct 19, 2021Updated 5 years ago
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆35Sep 25, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Oct 30, 2023Updated 3 years ago
- better(?) xargs in go☆148Jan 26, 2018Updated 8 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated last year
- find large indels (in the blind spot between GATK/freebayes and SV callers)☆39Dec 3, 2017Updated 8 years ago
- tabix file access with golang using biogo machinery☆10Jul 1, 2025Updated last year
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- ☆21Dec 26, 2025Updated 10 months ago
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- biogo high throughput sequencing repository☆133Aug 28, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Streaming algorithm for computing kmer statistics for massive genomics datasets☆54Feb 18, 2020Updated 6 years ago
- Genome inference from a population reference graph☆96Apr 1, 2025Updated last year
- A universal genomic coordinate translator for comparative genomics☆12Jul 6, 2017Updated 9 years ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆109Dec 14, 2020Updated 5 years ago
- A genotype query interface.☆136Mar 29, 2021Updated 5 years ago
- mreps: software for tandem repeat identification in DNA☆16Nov 13, 2019Updated 6 years ago