PierreBSC / Viral-TrackLinks
☆62Updated 5 years ago
Alternatives and similar repositories for Viral-Track
Users that are interested in Viral-Track are comparing it to the libraries listed below
Sorting:
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 4 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 4 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆80Updated 9 months ago
- ☆88Updated 3 months ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆97Updated 2 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- ☆67Updated 2 years ago
- ☆59Updated last year
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 5 years ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Updated 3 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆77Updated 2 years ago
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆32Updated 4 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- ☆88Updated 4 years ago
- Links to ATAC-seq analysis tools☆73Updated 4 years ago
- Tools for single-cell data processing☆128Updated last year
- Immunology-related bioinformatics data and tools☆76Updated last year
- mgatk: mitochondrial genome analysis toolkit☆109Updated 10 months ago
- A tool that allows to get UMI counts from a single cell protein assay☆86Updated 7 months ago
- SCSA: cell type annotation for single-cell RNA-seq data☆92Updated 2 years ago
- epigenome analysis to rank transcription factors☆31Updated 2 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆63Updated 3 months ago
- R implementation of MULTI-seq sample classification workflow☆64Updated 2 years ago
- ☆74Updated 2 years ago
- Bayesian network plot for the enrichment analysis results☆66Updated last year