zhangzlab / covid_balf
R script for the covid balf data analysis
☆65Updated 4 years ago
Alternatives and similar repositories for covid_balf:
Users that are interested in covid_balf are comparing it to the libraries listed below
- Publication Page for Satpathy*, Granja* et al 2019☆92Updated 4 years ago
- ☆61Updated last year
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- ☆59Updated 5 years ago
- ☆57Updated 4 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆78Updated last year
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- ☆60Updated 4 years ago
- Tools used in Human Cell Landscape(HCL)☆54Updated 4 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆98Updated 2 weeks ago
- Analysis of cell-cell communication at single-cell resolution☆100Updated 6 months ago
- Repository for Cibersortx☆57Updated 4 years ago
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆84Updated 5 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆93Updated last year
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 8 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆97Updated last year
- SCSA: cell type annotation for single-cell RNA-seq data☆89Updated last year
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated last year
- ☆46Updated 2 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆68Updated 3 years ago
- Analysis pipeline for ATAC-seq Data☆60Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVI…☆49Updated 3 years ago
- simpler single cell RNAseq data clustering☆40Updated last month
- Publication Page for MPAL Paper 2019☆80Updated 4 years ago
- Analysis pipeline for ATAC-seq data☆48Updated last year
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆91Updated 2 years ago
- Tools for single-cell data processing☆122Updated 10 months ago