zhangzlab / covid_balfLinks
R script for the covid balf data analysis
☆65Updated 5 years ago
Alternatives and similar repositories for covid_balf
Users that are interested in covid_balf are comparing it to the libraries listed below
Sorting:
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- SCSA: cell type annotation for single-cell RNA-seq data☆91Updated 2 years ago
- cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data☆141Updated last year
- SingleCellNet: classify single cells across species and platforms☆138Updated 2 years ago
- R package to access DoRothEA's regulons☆149Updated last year
- Single-Cell Clustering Assessment Framework☆105Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆113Updated 10 months ago
- ☆131Updated last year
- AUCell: score single cells with gene regulatory networks☆166Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆109Updated 4 months ago
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 4 months ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆96Updated 2 years ago
- In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes☆111Updated 7 months ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- Tools for single-cell data processing☆126Updated last year
- A package for automated processing of single cell RNA-seq data in cancer☆108Updated last week
- chromatin Variability Across Regions (of the genome!)☆181Updated last year
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- ☆71Updated 2 years ago
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆106Updated last month
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆111Updated 5 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆92Updated 3 years ago
- A guide to using a Seurat object in conjunction with RNA Velocity☆139Updated 3 years ago
- ☆62Updated 6 years ago
- URD - Reconstruction of Branching Developmental Trajectories☆124Updated 4 years ago
- scDIOR: Single cell data IO softwaRe☆145Updated 3 years ago
- ☆47Updated 3 years ago