ajwilk / 2020_Wilk_COVIDView external linksLinks
Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"
☆49Oct 22, 2021Updated 4 years ago
Alternatives and similar repositories for 2020_Wilk_COVID
Users that are interested in 2020_Wilk_COVID are comparing it to the libraries listed below
Sorting:
- ☆13Jun 18, 2018Updated 7 years ago
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Nov 24, 2022Updated 3 years ago
- bioinformatics R test code☆14Feb 1, 2026Updated 2 weeks ago
- ☆22Nov 9, 2023Updated 2 years ago
- set of functions for genomics data analysis☆10Apr 22, 2022Updated 3 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Sep 19, 2024Updated last year
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Jul 22, 2020Updated 5 years ago
- ☆13Dec 15, 2021Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆17Aug 12, 2022Updated 3 years ago
- ☆22Mar 6, 2023Updated 2 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆116Apr 26, 2025Updated 9 months ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆23Apr 3, 2025Updated 10 months ago
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆19Aug 24, 2023Updated 2 years ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆17Apr 30, 2022Updated 3 years ago
- weighted indexes for clustering evaluation☆14Apr 18, 2020Updated 5 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆31Jul 13, 2024Updated last year
- Collection of scripts for analysis of pan fetal immune atlas☆29Aug 11, 2022Updated 3 years ago
- ☆33Jul 17, 2021Updated 4 years ago
- ☆32Jan 26, 2022Updated 4 years ago
- ☆14Jul 1, 2025Updated 7 months ago
- ☆17Jan 9, 2023Updated 3 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated 10 months ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆81Oct 29, 2024Updated last year
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Jul 15, 2025Updated 7 months ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Jun 21, 2022Updated 3 years ago
- ☆37Sep 20, 2022Updated 3 years ago
- ☆114Sep 16, 2020Updated 5 years ago
- ☆23Jul 9, 2025Updated 7 months ago
- Repository for codes for the HBCA paper☆41Mar 17, 2023Updated 2 years ago
- ☆21Dec 23, 2024Updated last year
- various tools to download, convert and process the full text of scientific articles☆10Apr 2, 2024Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- ☆10May 25, 2025Updated 8 months ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- ☆13Updated this week
- R script for the covid balf data analysis☆65Aug 12, 2020Updated 5 years ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated 11 months ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆22Jul 6, 2023Updated 2 years ago
- ☆21Jul 7, 2025Updated 7 months ago