ajwilk / 2020_Wilk_COVID
Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"
☆49Updated 3 years ago
Alternatives and similar repositories for 2020_Wilk_COVID:
Users that are interested in 2020_Wilk_COVID are comparing it to the libraries listed below
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆44Updated last year
- ☆37Updated 3 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- ☆30Updated 3 years ago
- ☆42Updated 3 years ago
- scWGCNA☆58Updated 2 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- ☆59Updated 5 years ago
- R-code used for single-cell RNA-Seq analysis of kidney data.☆17Updated 5 years ago
- ☆60Updated 4 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆41Updated 3 years ago
- ☆61Updated last year
- Functional Inference of Gene Regulation☆41Updated 9 months ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆44Updated 3 months ago
- ☆79Updated last year
- ☆61Updated 9 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆73Updated 11 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- ☆46Updated 2 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆77Updated 7 months ago
- A tool for removing doublets from single-cell RNA-seq data☆73Updated 4 years ago
- Tools used in Human Cell Landscape(HCL)☆54Updated 4 years ago
- ☆57Updated 4 years ago
- Repository for Cibersortx☆58Updated 4 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago