ajwilk / 2020_Wilk_COVIDLinks
Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"
☆49Updated 4 years ago
Alternatives and similar repositories for 2020_Wilk_COVID
Users that are interested in 2020_Wilk_COVID are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 3 years ago
- ☆63Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 4 years ago
- ☆47Updated 10 months ago
- ☆39Updated 4 years ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆56Updated 2 years ago
- Repository for Cibersortx☆61Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆64Updated 3 years ago
- ☆62Updated 5 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆79Updated 7 months ago
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated 3 months ago
- R package for the analysis of single-cell immune repertoires☆43Updated 9 months ago
- Tools used in Human Cell Landscape(HCL)☆56Updated 5 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆91Updated 6 months ago
- ☆78Updated last year
- ☆61Updated last year
- R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identi…☆25Updated 3 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- Unified access to several second-generation deconvolution methods☆88Updated last month
- Bayesian network plot for the enrichment analysis results☆66Updated last year
- ☆32Updated 3 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Mapping the Functional Landscape of TCR Repertoire☆35Updated 4 years ago
- ☆46Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 5 months ago
- A portable and fast single cell type identifier☆64Updated 4 years ago