ajwilk / 2020_Wilk_COVID

Related projects ⓘ

Alternatives and complementary repositories for 2020_Wilk_COVID

• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆32Updated 4 years ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆23Updated 3 years ago
• scCOVID-19 / COVIDPBMC
  Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection
  ☆40Updated 2 years ago
• ggjlab / HCL
  Tools used in Human Cell Landscape(HCL)
  ☆52Updated 4 years ago
• Single-Cell-Genomics-Group-CNAG-CRG / Tumor-Immune-Cell-Atlas
  Code repository for the Tumor Immune Cell Atlas (TICA) project
  ☆61Updated 2 years ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆41Updated 9 months ago
• shenorrLabTRDF / bseqsc
  Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline
  ☆42Updated last year
• KChen-lab / METAFlux
  ☆48Updated 4 months ago
• cartal / HCA_Heart
  This is the official repository for the Human Cell Atlas Heart project.
  ☆28Updated 4 years ago
• elimereu / matchSCore2
  ☆53Updated 3 years ago
• MarioniLab / EmbryoTimecourse2018
  Data and analysis scripts for our Embryo Timecourse paper.
  ☆65Updated 4 years ago
• CFeregrino / scWGCNA
  scWGCNA
  ☆55Updated 2 years ago
• Coolgenome / iTALK
  ☆58Updated 5 years ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆43Updated 4 years ago
• BioinformaticsFMRP / PanCanStem_Web
  ☆30Updated 2 years ago
• bvieth / scRNA-seq-pipelines
  Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"
  ☆53Updated 3 years ago
• neurorestore / DE-analysis
  ☆37Updated 3 years ago
• cailab-tamu / scTenifoldKnk
  R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
  ☆36Updated 2 years ago
• crazyhottommy / pyflow-cellranger
  A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data
  ☆16Updated 5 years ago
• EDePasquale / DoubletDecon
  A tool for removing doublets from single-cell RNA-seq data
  ☆69Updated 3 years ago
• quadbio / scMultiome_analysis_vignette
  Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
  ☆47Updated 7 months ago
• Michorlab / tnbc_scrnaseq
  ☆40Updated 6 years ago
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆41Updated last month
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆17Updated 5 years ago
• GfellerLab / SuperCell
  Coarse-graining of large single-cell RNA-seq data into metacells
  ☆68Updated 2 months ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆46Updated last year
• bei-lab / scRNA-AHCA
  Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
  ☆39Updated 10 months ago
• McGranahanLab / TcellExTRECT
  ☆46Updated last year
• liulab-dfci / RIMA_pipeline
  ☆74Updated 10 months ago
• cssmillie / ulcerative_colitis
  ☆59Updated 4 years ago