PennHui2016 / OpDEALinks
A toolkit for optimal workflow recommendation for proteomics data differential expression analysis
☆15Updated 7 months ago
Alternatives and similar repositories for OpDEA
Users that are interested in OpDEA are comparing it to the libraries listed below
Sorting:
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Inference of TCR motifs☆30Updated last month
- single cell Gene co-Expression Network Analysis☆9Updated 2 years ago
- ☆15Updated 3 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- HTCA Analysis Tools☆5Updated 2 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- ☆18Updated last month
- An R/Bioconductor package to identify higher-order molecular phenotypes☆16Updated last year
- ☆19Updated last year
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆13Updated last week
- A collection of perl scripts for NGS analysis☆16Updated 8 months ago
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆11Updated 3 months ago
- Critical downstream analysis steps for single-cell RNA sequencing data☆13Updated 4 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆14Updated 5 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆18Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆33Updated 3 years ago
- Python playground for cell-type-specific biology☆10Updated 3 weeks ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 4 months ago
- TRUST4 manuscript evaluation☆14Updated 2 years ago
- ☆20Updated last year
- ☆19Updated 10 months ago
- ☆13Updated last year
- ☆21Updated last year
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆13Updated 4 months ago
- ☆10Updated last week
- ☆17Updated last year
- ☆13Updated 6 years ago