Alternatives and similar repositories for Computational-Genome-Analysis:

Users that are interested in Computational-Genome-Analysis are comparing it to the libraries listed below

• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆53Updated 3 years ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• hidelab / diffcoexp
  Differential coexpression analysis
  ☆15Updated last year
• Phillip-a-richmond / GenomeAnalysisModule
  Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…
  ☆24Updated 2 years ago
• slzhao / QC3
  QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.
  ☆31Updated 8 years ago
• TheJacksonLaboratory / JAXBD2K-ShortCourse
  This repository contains course materials from JAX-BD2K workshop.
  ☆31Updated 5 years ago
• yuchaojiang / CODEX2
  Full-spectrum copy number variation detection by high-throughput DNA sequencing
  ☆37Updated 3 years ago
• jlab-code / MethylStar
  A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.
  ☆33Updated 3 years ago
• hbctraining / main
  ☆52Updated this week
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 5 years ago
• TGAC / 361Division
  361 Division - Scientific Training, Education and Learning
  ☆28Updated 4 years ago
• hbctraining / Intro-to-rnaseq-hpc-salmon
  ☆48Updated 3 years ago
• bioinformatics-core-shared-training / cruk-summer-school-2018
  Summer school course materials collection
  ☆25Updated 6 years ago
• GuangchuangYu / enrichment4GTEx_clusterProfiler
  reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE
  ☆33Updated 3 years ago
• BIMSBbioinfo / Strategies_for_analyzing_BS-seq
  ☆8Updated 7 years ago
• olgabot / rna-seq-diff-exprn
  RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code …
  ☆55Updated 12 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 5 years ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated last year
• bahlolab / bioinfotools
  Documenting usage and experience with bioinformatic tools
  ☆41Updated 9 years ago
• ICBI / viGEN
  viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data
  ☆27Updated 3 months ago
• marvin-jens / find_circ
  tools to find circRNAs in RNA-seq data
  ☆40Updated 7 years ago
• arq5x / bedtools-protocols
  ☆78Updated 10 years ago
• griffithlab / rnaseq_tutorial_wiki
  The wiki repo, with pull request enabled, for the rnaseq_tutorial
  ☆25Updated 4 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆47Updated 3 months ago
• khuang28jhu / bs3
  BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
  ☆27Updated 5 years ago
• broadinstitute / gistic2
  Genomic Identification of Significant Targets in Cancer (GISTIC), version 2
  ☆48Updated 2 years ago
• pughlab / ConsensusCruncher
  ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…
  ☆20Updated 2 years ago
• stephenfloor / extract-transcript-regions
  For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…
  ☆34Updated last year
• KHP-Informatics / illumina-array-protocols
  processing illumina SNP arrays
  ☆19Updated 7 years ago