Collection of useful bioinformatic functions and tools for various computational biology pipelines
☆49Jul 13, 2026Updated 2 weeks ago
Alternatives and similar repositories for neurosnap
Users that are interested in neurosnap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Apr 1, 2024Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 8 months ago
- Predicting the effect of mutations on protein stability using a simple orientational potential.☆20Jul 5, 2024Updated 2 years ago
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- Protein Structure Analysis☆86Apr 29, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Structure-aware fine-tuning of protein language models for joint prediction of multiple developability properties from protein structure …☆35Jul 5, 2026Updated 3 weeks ago
- ☆21Jun 2, 2026Updated last month
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 3 years ago
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 2 months ago
- ☆51Sep 25, 2024Updated last year
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 5 months ago
- Source code for The Protein Design Archive web application.☆10May 8, 2026Updated 2 months ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆55Jul 22, 2025Updated last year
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆54Jun 22, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 5 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆280May 11, 2026Updated 2 months ago
- Bilingual Language Model for Protein Sequence and Structure☆318Mar 6, 2026Updated 4 months ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 2 months ago
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆15May 26, 2026Updated 2 months ago
- ☆16Dec 10, 2024Updated last year
- Protein stability prediction using rewired protein generative models☆87Jul 15, 2026Updated 2 weeks ago
- ☆39Nov 23, 2025Updated 8 months ago
- [Bioinformatics 2025] Official implementation of the paper "ParaSurf: A Surface-Based Deep Learning Approach for Paratope-Antigen Interac…☆29Jan 28, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Biomolecular design by sampling from generative models☆51Jul 23, 2026Updated last week
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated 3 months ago
- Code for ColabDock paper☆157May 1, 2025Updated last year
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 4 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆144Nov 11, 2025Updated 8 months ago
- ☆212Apr 21, 2025Updated last year
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆87Sep 11, 2025Updated 10 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆535Mar 22, 2026Updated 4 months ago
- ML-based ligand generator☆23May 8, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆193Jun 24, 2024Updated 2 years ago
- ☆16May 18, 2026Updated 2 months ago
- Bayesian Optimization for protein design and mining☆26Jul 2, 2026Updated 3 weeks ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆74Feb 13, 2026Updated 5 months ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆15Jan 23, 2026Updated 6 months ago
- bioinformatics tools running on modal☆159Jun 3, 2026Updated last month