compbiomed-unito / acdc-nnLinks
☆21Updated 2 years ago
Alternatives and similar repositories for acdc-nn
Users that are interested in acdc-nn are comparing it to the libraries listed below
Sorting:
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated last month
- Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term☆28Updated 7 months ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 5 months ago
- Code for ApoDock☆20Updated 3 months ago
- Deep Binding Structure RMSD Prediction☆22Updated 4 years ago
- Automated construction of protein chimeras and their analysis.☆15Updated last year
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- Docking Tool Benchmarking Workflow☆24Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last month
- Some scripts that I keep using over and over.☆19Updated last week
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- scripts to find PBD structures for cancer driver proteins☆31Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated last month
- ☆33Updated last year
- ☆19Updated 2 years ago
- Optimization of binding affinities in chemical space for drug discovery☆35Updated 2 years ago
- Extract the PAE & pLDDT value of Alphafold2 from .pkl to .png, .csv & .pdb file.☆22Updated 3 years ago
- ☆20Updated 2 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated last year
- ☆33Updated last year
- Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions☆18Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆28Updated last week
- WaterDock-2.0 implementation with Akshay Sridhar☆15Updated last year
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Updated 3 years ago
- ☆13Updated 7 years ago
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- ☆19Updated last year
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆10Updated last year