compbiomed-unito / acdc-nnLinks
☆21Updated 2 years ago
Alternatives and similar repositories for acdc-nn
Users that are interested in acdc-nn are comparing it to the libraries listed below
Sorting:
- Scores for Hydrophobicity and Charges based on SASAs☆34Updated last month
- Automated construction of protein chimeras and their analysis.☆15Updated last year
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 2 months ago
- ☆26Updated last week
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 6 months ago
- Code for ApoDock☆20Updated 4 months ago
- Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term☆28Updated 8 months ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictions☆41Updated last week
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆34Updated 3 weeks ago
- ☆20Updated last year
- Physical energy function for protein sequence design☆31Updated 2 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated last year
- PyDock Tutorial☆32Updated 7 years ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆30Updated last week
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 2 months ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆10Updated last year
- Making Protein folding accessible to all!☆22Updated last year
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- Some scripts that I keep using over and over.☆19Updated last month
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention☆52Updated last month
- Fast and accurate molecular docking with an AI pose scoring function☆41Updated last year
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- ☆70Updated 4 months ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Updated 3 years ago