Rank binders by structure modeling
โ16Apr 10, 2026Updated last month
Alternatives and similar repositories for APPRAISE
Users that are interested in APPRAISE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2xโ33May 11, 2026Updated last week
- [๐ง๐๐ญ๐ฎ๐ซ๐ ๐ฆ๐๐๐ก๐ข๐ง๐ ๐ข๐ง๐ญ๐๐ฅ๐ฅ๐ข๐ ๐ง๐๐๐] ImmunoStruct enables multimodal deep learning for immunogenicity predictionโ44Mar 5, 2026Updated 2 months ago
- Antigen-receptor Design Against Peptide-MHC Targetsโ21Jan 9, 2026Updated 4 months ago
- โ15Jun 3, 2025Updated 11 months ago
- โ65Sep 14, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean โข AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Protein representation and design under a single training schemeโ24May 12, 2026Updated last week
- โ26May 12, 2026Updated last week
- โ43Apr 30, 2024Updated 2 years ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTionโ13Jul 4, 2024Updated last year
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNNโ29May 10, 2026Updated last week
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucinationโ52Mar 25, 2026Updated last month
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learningโ23Mar 19, 2025Updated last year
- Solvent accessible surface area calculationโ21Mar 12, 2025Updated last year
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinityโ13Feb 6, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits โข AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Introduction to cyclic peptide simulations and our group's protocols.โ17Sep 21, 2023Updated 2 years ago
- โ55Mar 12, 2026Updated 2 months ago
- โ12Nov 16, 2023Updated 2 years ago
- โ13Jul 11, 2023Updated 2 years ago
- Code for deep learning guided design of dynamic proteinsโ33Jul 16, 2024Updated last year
- My work on building a deep neural network for fast and accurate protein protein interaction predictionโ11Mar 13, 2024Updated 2 years ago
- โ16Sep 26, 2025Updated 7 months ago
- AlphaBind code + model accompanying pre-printโ89Jul 24, 2025Updated 9 months ago
- โ15May 29, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)โ54Apr 24, 2026Updated 3 weeks ago
- Generative diverse protein backbones by protein language modelโ35Feb 27, 2026Updated 2 months ago
- โ127Apr 4, 2026Updated last month
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexesโ52Oct 27, 2025Updated 6 months ago
- โ53Apr 23, 2026Updated 3 weeks ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.โ10Jan 7, 2026Updated 4 months ago
- This repository is the official implementation of Bidirectional Learning for Offline Infinite-width Model-based Optimization (NeurIPS 202โฆโ14Jan 19, 2023Updated 3 years ago
- Template-based protein design with Raygunโ81Apr 12, 2026Updated last month
- Official repository for DiffPepBuilder and DiffPepDock toolsโ126Oct 24, 2025Updated 6 months ago
- GPUs on demand by Runpod - Special Offer Available โข AdRun AI, ML, and HPC workloads on powerful cloud GPUsโwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fiโฆโ15Nov 24, 2020Updated 5 years ago
- โ21Oct 26, 2024Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteinsโ125May 27, 2025Updated 11 months ago
- Demos of many Rosetta applicationsโ25Jun 10, 2025Updated 11 months ago
- โ15Jun 11, 2021Updated 4 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint Tโฆโ28Apr 22, 2025Updated last year
- It's a package for evaluation of predicted poses, right?โ77Mar 27, 2026Updated last month