GradinaruLab / APPRAISE
Rank binders by structure modeling
☆15Updated 9 months ago
Alternatives and similar repositories for APPRAISE:
Users that are interested in APPRAISE are comparing it to the libraries listed below
- Implementation of Protein Invariant Point Packer (PIPPack)☆31Updated 7 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆21Updated 6 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- Extension of ThermoMPNN for double mutant predictions☆19Updated this week
- ☆28Updated last year
- An antibody-specific language model focusing on NGL prediction☆23Updated 4 months ago
- Code for humanization of antibody and nanobody☆34Updated last month
- ☆16Updated last week
- ☆36Updated last year
- Generative diverse protein backbones by protein language model☆29Updated last month
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆33Updated 2 years ago
- ☆19Updated 2 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆23Updated 6 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆39Updated last month
- Explicit crosslinks in AlphaFold 3☆14Updated last month
- Code for deep learning guided design of dynamic proteins☆17Updated 6 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆16Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆15Updated last year
- ☆60Updated last month
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆38Updated 8 months ago
- ☆18Updated 2 weeks ago
- ☆44Updated 2 weeks ago
- ☆11Updated 3 years ago
- ☆32Updated 4 months ago
- ☆17Updated this week
- ☆14Updated 3 months ago
- Making Protein folding accessible to all!☆19Updated last year
- Some scripts that I keep using over and over.☆18Updated 2 weeks ago
- ☆25Updated 2 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆23Updated 11 months ago