Alternatives and similar repositories for ReprogBERT

Users that are interested in ReprogBERT are comparing it to the libraries listed below

• csi-greifflab / developability_profiling
  ☆28Updated 5 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆23Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆40Updated last year
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆21Updated 8 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆36Updated last year
• tianlt / deepdirect
  ☆17Updated last year
• Lailabcode / DeepViscosity
  DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…
  ☆20Updated 6 months ago
• WeiLab-Biology / DeepProSite
  ☆34Updated 2 years ago
• brineylab / BALM-paper
  ☆17Updated last month
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆13Updated last year
• ddd9898 / DeepNano
  Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.
  ☆43Updated last year
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆37Updated last year
• LSSI-ETH / meta-learning-for-protein-engineering
  Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…
  ☆20Updated last year
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆36Updated 2 years ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆31Updated last year
• dahjan / DMS_opt
  ☆74Updated 5 years ago
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆34Updated 3 years ago
• RosettaCommons / FvHallucinator
  ☆28Updated 3 years ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆21Updated 3 years ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• ak422 / DDAffinity
  ☆24Updated 8 months ago
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆36Updated last year
• ChenPy00 / PPB-Affinity
  Baseline model for PPB-Affinity benchmark data
  ☆34Updated 8 months ago
• CarbonMatrixLab / AbX
  Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints
  ☆47Updated 7 months ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆16Updated 2 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• ChemloverYuchen / BioScore
  ☆15Updated 6 months ago
• skalyaanamoorthy / PSLMs
  ☆21Updated last year