napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
☆63Oct 27, 2024Updated last year
Alternatives and similar repositories for cellpose-napari
Users that are interested in cellpose-napari are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- StarDist plugin for napari☆39Aug 24, 2024Updated last year
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- Multiple file format reading directly into napari using pure Python☆38Oct 15, 2025Updated 5 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 9 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆18Updated this week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Track and lineage visualization with btrack and Napari☆45Sep 29, 2025Updated 6 months ago
- Spotiflow plugin for napari☆16Feb 2, 2026Updated 2 months ago
- ☆33May 2, 2025Updated 11 months ago
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Dec 1, 2025Updated 4 months ago
- ilastik plugin for napari☆15Mar 2, 2026Updated last month
- A napari plugin to view and edit layer metadata☆13Apr 6, 2026Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆56May 1, 2025Updated 11 months ago
- ☆25May 16, 2023Updated 2 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Apr 6, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Apr 7, 2026Updated last week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆46May 1, 2025Updated 11 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 4 months ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆119Apr 1, 2026Updated last week
- napari plugin for trackastra☆17Nov 12, 2025Updated 5 months ago
- Segment images utilizing pre-trained neural networks as feature extractors☆51Apr 2, 2026Updated last week
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 2 months ago
- 1d plotting in napari-based canvas.☆25Updated this week
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆13Oct 13, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- native Python dataclasses for the OME data model☆65Apr 2, 2026Updated last week
- Generate multifunctional and macro recordable GUIs from Python classes☆45Apr 2, 2026Updated last week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Mar 30, 2026Updated 2 weeks ago
- ☆21Apr 1, 2024Updated 2 years ago
- napari widgets for start-to-finish batch processing☆15Apr 1, 2026Updated 2 weeks ago
- A self-supervised denoising algorithm.☆28Apr 6, 2024Updated 2 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 4 months ago
- ☆38Mar 9, 2026Updated last month
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A napari plugin for zarr backed OME-NGFF images☆46Updated this week
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12Apr 7, 2026Updated last week
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 7 months ago
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Particle tracking by solving linear assignment problem.☆64Apr 1, 2026Updated last week
- ☆52May 1, 2025Updated 11 months ago
- Discover, install, and share napari plugins☆54Mar 6, 2026Updated last month