MouseLand / cellpose-napariLinks
napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
☆54Updated 8 months ago
Alternatives and similar repositories for cellpose-napari
Users that are interested in cellpose-napari are comparing it to the libraries listed below
Sorting:
- StarDist plugin for napari☆38Updated 10 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 2 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated this week
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 4 months ago
- Cookiecutter for napari plugins☆70Updated 8 months ago
- ☆51Updated 2 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 2 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- Multiple file format reading directly into napari using pure Python☆37Updated 11 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 8 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated 2 months ago
- ☆23Updated 2 weeks ago
- Lectures for a napari training course☆50Updated last year
- Image reading, metadata management, and image writing for Microscopy images in Python☆92Updated last week
- Python libraries for loading, running and packaging bioimage.io models☆32Updated 2 weeks ago
- Process images using SimpleITK in napari☆21Updated 2 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆75Updated last week
- ☆24Updated 2 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆80Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆27Updated 2 months ago
- Command-line client for Fractal☆46Updated last week
- Cell tracking and segmentation software☆120Updated last week
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated 2 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 9 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last week
- A napari plugin for zarr backed OME-NGFF images☆33Updated 3 weeks ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 7 months ago