napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
☆66Oct 27, 2024Updated last year
Alternatives and similar repositories for cellpose-napari
Users that are interested in cellpose-napari are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- StarDist plugin for napari☆41Aug 24, 2024Updated 2 years ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated 2 years ago
- Multiple file format reading directly into napari using pure Python☆38Oct 15, 2025Updated 11 months ago
- ☆33May 2, 2025Updated last year
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Track and lineage visualization with btrack and Napari☆46Sep 29, 2025Updated 11 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated last month
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated 2 months ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 6 months ago
- A napari plugin to view and edit layer metadata☆13Sep 8, 2026Updated 2 weeks ago
- ☆25May 16, 2023Updated 3 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆57May 1, 2025Updated last year
- Image reading, metadata management, and image writing for Microscopy images in Python☆132Sep 15, 2026Updated last week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆48May 1, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Updated this week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆30Jun 16, 2026Updated 3 months ago
- Automated batch processing of cell and tissue microscopy image data in Napari☆22Aug 31, 2026Updated 3 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆54Aug 31, 2026Updated 3 weeks ago
- Spotiflow plugin for napari☆19May 19, 2026Updated 4 months ago
- ☆27Sep 11, 2026Updated last week
- Segment images utilizing pre-trained neural networks as feature extractors☆52Jul 3, 2026Updated 2 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 9 months ago
- napari plugin for trackastra☆19Jul 16, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Speed up coding/extending image analysis in Python.☆37Sep 3, 2026Updated 2 weeks ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆13Oct 13, 2025Updated 11 months ago
- ☆15Apr 1, 2026Updated 5 months ago
- Generate multifunctional and macro recordable GUIs from Python classes☆47Aug 10, 2026Updated last month
- 1d plotting in napari-based canvas.☆25Sep 14, 2026Updated last week
- native Python dataclasses for the OME data model☆68Apr 2, 2026Updated 5 months ago
- ☆21Apr 1, 2024Updated 2 years ago
- napari widgets for start-to-finish batch processing☆15Jun 1, 2026Updated 3 months ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆19Sep 10, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆24Jul 22, 2026Updated 2 months ago
- A self-supervised denoising algorithm.☆30Apr 6, 2024Updated 2 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 9 months ago
- Cookiecutter for napari plugins☆72Nov 6, 2024Updated last year
- ☆39Sep 11, 2026Updated last week
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Sep 9, 2026Updated 2 weeks ago
- Discover, install, and share napari plugins☆54Mar 6, 2026Updated 6 months ago