jluethi / napari-feature-visualizationLinks
Visualizing feature measurements on label images in napari
☆10Updated last year
Alternatives and similar repositories for napari-feature-visualization
Users that are interested in napari-feature-visualization are comparing it to the libraries listed below
Sorting:
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 9 months ago
- ☆25Updated 2 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 5 months ago
- A stable diffusion demo for napari☆11Updated 2 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 2 weeks ago
- python tools for BigDataViewer☆22Updated 11 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 3 weeks ago
- ilastik plugin for napari☆14Updated last week
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Updated 8 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- Command-line client for Fractal☆47Updated last week
- ☆22Updated 5 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated 2 months ago
- Python libraries for loading, running and packaging bioimage.io models☆34Updated 3 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 3 weeks ago
- Multiple file format reading directly into napari using pure Python☆39Updated 2 months ago
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- GPU-accelerated Image Processing library for Python☆52Updated last week
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 2 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 3 months ago
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- StarDist plugin for napari☆38Updated last year
- ☆36Updated last year
- QuPath extension for Cellsparse☆19Updated 7 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year