COBA-NIH / MicroscopyForBeginnersReferenceGuideLinks
A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
☆28Updated last month
Alternatives and similar repositories for MicroscopyForBeginnersReferenceGuide
Users that are interested in MicroscopyForBeginnersReferenceGuide are comparing it to the libraries listed below
Sorting:
- A 3D interactivity toolbox for napari☆35Updated 2 months ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated 3 weeks ago
- ☆29Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆16Updated 2 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆22Updated 3 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- ☆21Updated last year
- ☆50Updated last month
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- ☆18Updated last month
- ☆15Updated 2 years ago
- A minimal Python package for reading OME-Zarr (meta)data☆31Updated 2 weeks ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last week
- ☆23Updated last month
- native Python dataclasses for the OME data model☆56Updated 3 weeks ago
- Browse your OMERO database from within napari.☆37Updated 2 weeks ago
- StarDist plugin for napari☆38Updated 10 months ago
- A platform for compiling, analyzing, and exploring tracking data☆45Updated 3 months ago
- ☆36Updated 2 weeks ago
- Command-line client for Fractal☆46Updated this week
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- Visualizing feature measurements on label images in napari☆10Updated 11 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated 2 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆27Updated last month
- Process images using SimpleITK in napari☆21Updated last month
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated last month
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 7 months ago
- ☆24Updated 2 years ago