Alternatives and similar repositories for napari-nD-annotator

Users that are interested in napari-nD-annotator are comparing it to the libraries listed below

• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆27Updated last month
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 4 months ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated 10 months ago
• tlambert03 / microsim
  ☆38Updated 3 weeks ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated this week
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆15Updated 2 years ago
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated last month
• zoccoler / napari-flim-phasor-plotter
  ☆11Updated this week
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated this week
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• True-North-Intelligent-Algorithms / notebooks-and-napari-widgets-for-dl
  A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.
  ☆15Updated 2 months ago
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆26Updated this week
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated last month
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆17Updated 2 months ago
• acquire-project / acquire-python
  Acquire: a multi-camera video streaming software focusing on microscopy
  ☆21Updated 7 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated last month
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated last month
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆82Updated this week
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• BIOP / ijp-kheops
  ☆16Updated 4 months ago
• haesleinhuepf / devbio-napari
  ☆50Updated last month
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆52Updated 3 weeks ago
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆18Updated last year
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆23Updated 7 months ago
• Kapoorlabs-CAPED / NapaTrackMater
  Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.
  ☆17Updated last month
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 2 months ago
• RoccoDAnt / napari-zelda
  ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari
  ☆20Updated 7 months ago
• bioimage-io / core-bioimage-io-python
  Python libraries for loading, running and packaging bioimage.io models
  ☆31Updated last month
• NEUBIAS / Defragmentation_TrainingSchool_EOSC-Life_2022
  "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…
  ☆15Updated 2 years ago