yfukai / laptrackLinks
Particle tracking by solving linear assignment problem.
☆52Updated this week
Alternatives and similar repositories for laptrack
Users that are interested in laptrack are comparing it to the libraries listed below
Sorting:
- ☆49Updated last month
- Track and lineage visualization with btrack and Napari☆45Updated 7 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- Use ImageJ functionality from napari☆31Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- Browse your OMERO database from within napari.☆37Updated this week
- 1d plotting in napari-based canvas.☆26Updated this week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ☆18Updated last month
- Denoising via adaptive binning.☆12Updated 11 months ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- StarDist plugin for napari☆38Updated 9 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆73Updated this week
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 6 months ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆19Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated last month
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆85Updated last week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 2 months ago
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 4 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- dask empowered fast4dreg☆11Updated 6 months ago
- Pure python/C++ micro-manager ecosystem☆36Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆26Updated last year