yfukai / laptrackLinks
Particle tracking by solving linear assignment problem.
☆60Updated last week
Alternatives and similar repositories for laptrack
Users that are interested in laptrack are comparing it to the libraries listed below
Sorting:
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆95Updated this week
- ☆51Updated 7 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 7 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- 1d plotting in napari-based canvas.☆25Updated last week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- Browse your OMERO database from within napari.☆39Updated last week
- ☆37Updated this week
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 9 months ago
- python tools for BigDataViewer☆22Updated 11 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last week
- StarDist plugin for napari☆38Updated last year
- Segment images utilizing pre-trained neural networks as feature extractors☆43Updated 3 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated 2 weeks ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆109Updated this week
- ☆42Updated last week
- Optimize image processing workflows in napari☆17Updated 7 months ago
- Creating figures and animations for multi-channel images with a focus on microscopy.☆78Updated 11 months ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- napari plugin for trackastra☆17Updated 3 weeks ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 2 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last month
- A napari plugin for making animations☆89Updated last week
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆36Updated last week
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- ☆33Updated 7 months ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- ☆20Updated 7 months ago