Alternatives and similar repositories for napari-trackastra

Users that are interested in napari-trackastra are comparing it to the libraries listed below

• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated last month
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆61Updated last month
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆30Updated 8 months ago
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆16Updated 3 years ago
• haesleinhuepf / devbio-napari
  ☆51Updated 8 months ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆101Updated last week
• HenriquesLab / PhotoFiTT
  Computational workflows to assess phototoxicity in live-cell microscopy experiments
  ☆11Updated 4 months ago
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆20Updated 2 years ago
• ariel-waisman / LabelsToROIs
  A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
  ☆23Updated 4 years ago
• BIOP / BIOP-desktop
  ☆14Updated 2 months ago
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆12Updated 9 months ago
• RoccoDAnt / napari-zelda
  ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari
  ☆25Updated last month
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆25Updated last year
• guiwitz / napari-convpaint
  Segment images utilizing pre-trained neural networks as feature extractors
  ☆46Updated last month
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆15Updated last year
• bauerdavid / napari-nD-annotator
  ☆37Updated last month
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 8 months ago
• zoccoler / napari-flim-phasor-plotter
  ☆12Updated 4 months ago
• TheDeanLab / navigate
  navigate - open source light-sheet microscope controls
  ☆38Updated this week
• True-North-Intelligent-Algorithms / notebooks-and-napari-widgets-for-dl
  A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.
  ☆18Updated last month
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated last year
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆25Updated last year
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆23Updated 4 months ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆55Updated 8 months ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆20Updated 2 months ago
• baigouy / EPySeg
  ☆21Updated last year
• maweigert / spotipy
  ☆12Updated last year
• ome / napari-omero
  Browse your OMERO database from within napari.
  ☆40Updated last week
• BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
  PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
  ☆28Updated last year
• BiAPoL / Image-data-science-with-Python-and-Napari-EPFL2022
  ☆16Updated 2 years ago