weigertlab / napari-trackastra
napari plugin for trackastra
☆13Updated 2 months ago
Alternatives and similar repositories for napari-trackastra:
Users that are interested in napari-trackastra are comparing it to the libraries listed below
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆12Updated 2 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆25Updated 2 months ago
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆25Updated last month
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆24Updated 8 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆17Updated 4 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆28Updated last week
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated last year
- A Board Game to teach co-localization analysis☆12Updated 2 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated last month
- ☆10Updated 5 months ago
- Particle tracking by solving linear assignment problem.☆49Updated 2 weeks ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Annotate microscopy images for CNN classifier☆11Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 3 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated last month
- Browse your OMERO database from within napari.☆35Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 7 months ago
- ☆44Updated 3 months ago
- 1d plotting in napari-based canvas.☆25Updated this week
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated last year
- A napari plugin to view and edit metadata☆10Updated last year
- ☆12Updated 8 months ago
- Multi-Object Tracker using Integer Linear Equations☆28Updated last week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated last month
- Running compute-intense parts of BigStitcher distributed☆21Updated last month
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆15Updated 3 weeks ago
- ☆15Updated this week
- ☆15Updated 2 years ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆61Updated last month