Alternatives and similar repositories for napari-trackastra

Users that are interested in napari-trackastra are comparing it to the libraries listed below

• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated 2 weeks ago
• True-North-Intelligent-Algorithms / notebooks-and-napari-widgets-for-dl
  A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.
  ☆17Updated 6 months ago
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆16Updated 3 years ago
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆15Updated 11 months ago
• tlambert03 / napari-omero
  Browse your OMERO database from within napari.
  ☆39Updated 2 weeks ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆30Updated 6 months ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆91Updated last week
• BIOP / BIOP-desktop
  ☆14Updated 3 weeks ago
• haesleinhuepf / devbio-napari
  ☆51Updated 6 months ago
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆60Updated 2 weeks ago
• bauerdavid / napari-nD-annotator
  ☆37Updated 2 months ago
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆39Updated last month
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 7 months ago
• zoccoler / napari-flim-phasor-plotter
  ☆12Updated 2 months ago
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆13Updated 7 months ago
• tlambert03 / microsim
  ☆42Updated 2 weeks ago
• RoccoDAnt / napari-zelda
  ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari
  ☆22Updated 11 months ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆19Updated 3 weeks ago
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆12Updated 2 years ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆25Updated last year
• guiwitz / napari-serialcellpose
  ☆15Updated 3 weeks ago
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆23Updated 2 months ago
• TheDeanLab / navigate
  navigate - open source light-sheet microscope controls
  ☆38Updated last week
• BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
  PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
  ☆28Updated last year
• maweigert / spotipy
  ☆12Updated last year
• ariel-waisman / LabelsToROIs
  A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
  ☆23Updated 4 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 10 months ago
• weigertlab / trackastra
  Transformer-based cell tracking for live-cell microscopy
  ☆108Updated last month
• sebi06 / napari_zeiss
  Use Napari Viewer to display CZI images
  ☆12Updated 3 years ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year