Alternatives and similar repositories for napari-assistant:

Users that are interested in napari-assistant are comparing it to the libraries listed below

• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆17Updated 2 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆25Updated 2 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆34Updated 2 months ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆32Updated last month
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆21Updated 4 months ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated last year
• AllenCell / napari-allencell-segmenter
  A plugin that enables image segmentation provided by Allen Institute for Cell Science
  ☆16Updated last year
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆19Updated 3 months ago
• andy-sweet / napari-metadata
  A napari plugin to view and edit metadata
  ☆10Updated last year
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated 8 months ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated last month
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆15Updated last month
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆12Updated last week
• jni / zarpaint
  Paint segmentations directly to on-disk/remote zarr arrays
  ☆15Updated 6 months ago
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated last year
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆32Updated 3 weeks ago
• guiwitz / napari-convpaint
  Segment images by pixel classification based on pre-trained convolutional layer feature extraction
  ☆25Updated last month
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated 5 months ago
• bioimage-io / core-bioimage-io-python
  Python libraries for loading, running and packaging bioimage.io models
  ☆28Updated last week
• stardist / stardist-napari
  StarDist plugin for napari
  ☆36Updated 4 months ago
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆25Updated this week
• bauerdavid / napari-nD-annotator
  ☆29Updated 3 weeks ago
• Kapoorlabs-CAPED / NapaTrackMater
  Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.
  ☆16Updated last month
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆20Updated this week
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆21Updated last month
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆45Updated this week
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆15Updated 3 weeks ago
• thewtex / ngff-zarr
  A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
  ☆27Updated this week
• bioimage-io / spec-bioimage-io
  Specification for the bioimage.io model description file.
  ☆19Updated this week