Multiple file format reading directly into napari using pure Python
☆39Oct 15, 2025Updated 5 months ago
Alternatives and similar repositories for napari-aicsimageio
Users that are interested in napari-aicsimageio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 8 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Mar 4, 2026Updated 2 weeks ago
- A napari plugin to view and edit layer metadata☆13Updated this week
- ☆25May 16, 2023Updated 2 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45May 1, 2025Updated 10 months ago
- Linking napari layers with Matplotlib plots☆43Mar 1, 2026Updated 3 weeks ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆63Oct 27, 2024Updated last year
- A fully scalable robust image feature extraction library.☆28Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 2 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- A relabeling tool for tiled segmentation with Dask☆17Sep 24, 2024Updated last year
- ilastik plugin for napari☆14Mar 2, 2026Updated 3 weeks ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆117Mar 13, 2026Updated last week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Mar 16, 2026Updated last week
- Cookiecutter for napari plugins☆71Nov 6, 2024Updated last year
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Mar 16, 2026Updated last week
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 3 months ago
- Template for creating a new python repository☆13Sep 28, 2025Updated 5 months ago
- ☆33May 2, 2025Updated 10 months ago
- Reference implementation of the Graph Exchange File Format☆37Updated this week
- Command-line client for Fractal☆49Updated this week
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆75Mar 2, 2026Updated 3 weeks ago
- Guide to python package development for scientists☆27Mar 9, 2026Updated 2 weeks ago
- Course on Deep Learning for imaging using PyTorch☆13Feb 2, 2022Updated 4 years ago
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆107Mar 9, 2026Updated 2 weeks ago
- A napari plugin for clustering objects according to their properties.☆90Mar 16, 2026Updated last week
- Generate multifunctional and macro recordable GUIs from Python classes☆45Mar 5, 2026Updated 2 weeks ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 3 months ago
- StarDist plugin for napari☆39Aug 24, 2024Updated last year
- A self-supervised denoising algorithm.☆28Apr 6, 2024Updated last year
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 2 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Jul 18, 2025Updated 8 months ago
- ☆13Aug 16, 2024Updated last year
- ☆52May 1, 2025Updated 10 months ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆227Updated this week
- 1d plotting in napari-based canvas.☆25Mar 16, 2026Updated last week
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Dec 1, 2025Updated 3 months ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆242Feb 21, 2025Updated last year