Feature extraction for labeled objects in images using regionprops from scikit-image
☆55May 1, 2025Updated 10 months ago
Alternatives and similar repositories for napari-skimage-regionprops
Users that are interested in napari-skimage-regionprops are comparing it to the libraries listed below
Sorting:
- ☆13Jan 22, 2026Updated last month
- Optimize image processing workflows in napari☆17May 1, 2025Updated 10 months ago
- ☆52May 1, 2025Updated 10 months ago
- A napari plugin to view and edit layer metadata☆13Mar 3, 2026Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 10 months ago
- Cookiecutter for napari plugins☆71Nov 6, 2024Updated last year
- Linking napari layers with Matplotlib plots☆43Mar 1, 2026Updated last week
- ☆15Updated this week
- A minimal dependency napari plugin giving access to scikit-image functions☆23Sep 3, 2025Updated 6 months ago
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆106Feb 11, 2026Updated 3 weeks ago
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Dec 1, 2025Updated 3 months ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- ☆16Jul 21, 2023Updated 2 years ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Mar 2, 2026Updated last week
- ☆33May 2, 2025Updated 10 months ago
- A napari plugin for clustering objects according to their properties.☆90Mar 2, 2026Updated last week
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Nov 10, 2022Updated 3 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆63Oct 27, 2024Updated last year
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Nov 21, 2024Updated last year
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆29Updated this week
- ☆38Dec 5, 2025Updated 3 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 3 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Updated this week
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Feb 25, 2026Updated last week
- Tools for handling FIB-SEM data and annotations☆22Apr 4, 2025Updated 11 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆60Jul 18, 2025Updated 7 months ago
- A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.☆12Apr 24, 2024Updated last year
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- An R package to detect collective spatio-temporal phenomena☆13Sep 25, 2025Updated 5 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 8 months ago
- dask empowered fast4dreg☆15Updated this week
- Dimensionality reduction (UMAP, t-SNE, PCA) for ImageJ/Fiji☆12May 6, 2025Updated 10 months ago
- Command-line client for Fractal☆48Mar 2, 2026Updated last week
- Evaluating the quality of a cell segmentation method without reference.☆13Jul 26, 2025Updated 7 months ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated last month
- ☆23Jun 27, 2025Updated 8 months ago