maurosilber / SMOLinks
Robust and unbiased estimation of the background distribution for fluorescence microscopy.
☆12Updated 2 months ago
Alternatives and similar repositories for SMO
Users that are interested in SMO are comparing it to the libraries listed below
Sorting:
- An R package to detect collective spatio-temporal phenomena☆13Updated 3 months ago
- A napari plugin to analysis point spread functions.☆13Updated 9 months ago
- 1d plotting in napari-based canvas.☆25Updated this week
- Denoising via adaptive binning.☆13Updated last year
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago
- ☆51Updated 7 months ago
- python tools for BigDataViewer☆22Updated last year
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- ☆20Updated 7 months ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 3 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- ☆12Updated 3 months ago
- Lectures for a napari training course☆50Updated 2 years ago
- A napari plugin to view and edit metadata☆12Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated last month
- ☆37Updated 3 weeks ago
- ☆13Updated 5 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- A Board Game to teach co-localization analysis☆13Updated last year
- StarDist plugin for napari☆38Updated last year
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆18Updated 3 weeks ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 5 months ago
- A stable diffusion demo for napari☆11Updated 2 years ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Updated 3 years ago
- napari plugin for trackastra☆17Updated last month