stardist / stardist-napariLinks
StarDist plugin for napari
☆38Updated last year
Alternatives and similar repositories for stardist-napari
Users that are interested in stardist-napari are comparing it to the libraries listed below
Sorting:
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 7 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated this week
- ☆51Updated 7 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆95Updated this week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆54Updated 7 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last week
- Python libraries for loading, running and packaging bioimage.io models☆34Updated 2 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- Image reading, metadata management, and image writing for Microscopy images in Python☆109Updated last week
- Cookiecutter for napari plugins☆71Updated last year
- ☆22Updated 5 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last month
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 4 months ago
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆34Updated this week
- ☆37Updated this week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- A template repo used to make new napari plugins☆29Updated last week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Browse your OMERO database from within napari.☆39Updated last week
- Lectures for a napari training course