BioimageAnalysisCoreWEHI / napari_lattice
Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.
☆13Updated last week
Alternatives and similar repositories for napari_lattice:
Users that are interested in napari_lattice are comparing it to the libraries listed below
- ☆11Updated last year
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated 2 weeks ago
- Dataset EXploration & Processing☆31Updated last year
- ☆13Updated 4 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated last week
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last week
- ☆10Updated 6 months ago
- A napari plugin to view and edit metadata☆10Updated last year
- ☆16Updated 2 years ago
- A napari plugin to analysis point spread functions.☆9Updated 3 months ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- Lattice light-sheet post-processing utility.☆27Updated 2 weeks ago
- python tools for BigDataViewer☆21Updated last month
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- my first baby steps with Napari☆10Updated 5 years ago
- Use Napari Viewer to display CZI images☆11Updated 2 years ago
- ☆12Updated 4 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 3 months ago
- ☆12Updated 4 years ago
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- Process images using SimpleITK in napari☆20Updated 4 months ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆9Updated 3 years ago
- ☆17Updated 2 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 5 months ago
- ImageJ convenience layer for N5☆16Updated last week
- A self-supervised denoising algorithm.☆24Updated 10 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 months ago
- Optimize image processing workflows in napari☆17Updated 2 years ago