bgudenas / DeepLncRNA
☆11Updated 4 years ago
Alternatives and similar repositories for DeepLncRNA:
Users that are interested in DeepLncRNA are comparing it to the libraries listed below
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆14Updated 2 years ago
- ☆19Updated 10 months ago
- A legacy repository. Was replaced by distiller, cooler, and cooltools.☆18Updated 5 years ago
- ☆34Updated 2 years ago
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆9Updated 3 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 3 years ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆12Updated 7 months ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆16Updated last month
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆26Updated 6 years ago
- ☆17Updated 4 months ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆43Updated last year
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆26Updated 2 months ago
- ☆47Updated 2 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆22Updated 2 months ago
- bioinformatic pipeline for GLORI☆19Updated 9 months ago
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- A list of alternative splicing analysis resources☆42Updated 4 months ago
- Methods and analysis for Garcia-Nieto, et al. Somatic mutations☆15Updated 5 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated 5 months ago
- model-based understanding of single-cell CRISPR screening☆23Updated 3 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆23Updated 7 months ago
- Fork of the Polysolver project☆31Updated 5 years ago
- RNA editing tests☆16Updated 4 years ago
- General Use Scripts and Helper functions☆16Updated 6 years ago
- polyApipe☆14Updated last month
- ☆24Updated 4 months ago
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆32Updated 8 months ago
- Estimate locus specific human LINE-1 expression.☆32Updated 2 years ago
- Motif Scan and Enrichment Analysis (MoSEA)☆16Updated 4 years ago