arefeen / TAPAS
☆19Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for TAPAS
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- ☆53Updated 3 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆42Updated 7 years ago
- A Perl/R pipeline for plotting metagenes☆35Updated 3 years ago
- Demultiplexes a fastq.☆44Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆40Updated 7 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆64Updated 5 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆43Updated last year
- ☆30Updated 6 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆36Updated 2 years ago
- Tutorial Website☆53Updated 3 years ago
- A list of alternative splicing analysis resources☆37Updated last week
- Long-read Isoform Quantification and Analysis☆39Updated 3 months ago
- Estimate locus specific human LINE-1 expression.☆32Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆45Updated 10 months ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆26Updated 5 years ago
- Detecting intron retention from RNA-Seq experiments☆53Updated 4 months ago
- RNA editing tests☆16Updated 4 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆50Updated last year
- ☆37Updated last year
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆61Updated 4 months ago
- ☆58Updated 3 months ago
- Quantitation and visualization of differential alternative splicing events☆9Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 3 years ago
- fork of RSeQC python RNAseq metrics suit of tools☆46Updated 5 years ago
- ☆51Updated 6 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆40Updated 2 months ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆16Updated this week