An R package for ECM molecule annotation, classification, and analysis
☆14Sep 20, 2024Updated last year
Alternatives and similar repositories for MatrisomeAnalyzeR
Users that are interested in MatrisomeAnalyzeR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Mar 20, 2021Updated 5 years ago
- ☆12Jan 14, 2023Updated 3 years ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆45May 9, 2026Updated 2 months ago
- Holds the code and data to reproduce the analyses of Danaher & Kim et a;, "Advances in mixed cell deconvolution enable quantification of …☆12Dec 8, 2021Updated 4 years ago
- Automated pipeline for enrichment analysis in non-model organisms !☆16Feb 8, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Multi-omics multi-layered network integration and interpretation☆14Oct 15, 2024Updated last year
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Jan 9, 2023Updated 3 years ago
- In this repo, I explain how can we use clusterProfiler and Tidyverse to perform (GO or KEGG) enrichment analysis in R.☆28Sep 20, 2023Updated 2 years ago
- This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI…☆20Jul 3, 2024Updated 2 years ago
- public production version of sequin to share with the public☆11Jun 12, 2026Updated last month
- Example CellProfiler pipelines.☆20Jul 19, 2022Updated 4 years ago
- Single Cell Classification using RNA-seq data and Supervised Learning Algorithms☆13May 7, 2016Updated 10 years ago
- R package for metabolic enzyme enrichment anaylsis☆14Oct 24, 2025Updated 8 months ago
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆13Mar 11, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆23Mar 28, 2024Updated 2 years ago
- ☆25Feb 6, 2025Updated last year
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆21Jan 13, 2025Updated last year
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 3 years ago
- ☆12Mar 22, 2023Updated 3 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- ☆15Dec 21, 2022Updated 3 years ago
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆16Apr 15, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- SpellbookMerge is a mod for Pathfinder Wrath of the righteous that allows additional spellbook merging options☆21Mar 8, 2023Updated 3 years ago
- Detect hierarchical structures in cell-cell communications☆16Jan 26, 2025Updated last year
- ☆11Feb 14, 2023Updated 3 years ago
- Library to parse and process Nanoscope Dimension AFM files.☆10Jan 6, 2019Updated 7 years ago
- A collection of awesome lipidomics tools and resources☆17Jun 23, 2022Updated 4 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly☆28Jan 2, 2022Updated 4 years ago
- Code accompanying the manuscript "Tissue Schematics map the specialization of immune tissue motifs and their appropriation by tumors"☆13Mar 3, 2023Updated 3 years ago
- Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging☆14Jul 29, 2025Updated 11 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆11Apr 30, 2024Updated 2 years ago
- 📺 Discover the latest machine learning / AI courses on YouTube.☆25Nov 26, 2023Updated 2 years ago
- Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjection☆16Aug 28, 2023Updated 2 years ago
- UKRIN Kidney Analysis Toolbox☆14Mar 27, 2025Updated last year
- Hierarchical Random Forest for Information Transfer☆13May 26, 2021Updated 5 years ago
- ☆10Jan 15, 2020Updated 6 years ago
- CAISC (Clonal Architecture with Integrating SNV and CNV): a software to integrate copy number variation and single nucleotide mutations f…☆14Jul 19, 2021Updated 5 years ago