Interactive and integrated analysis of multiplexed tissue microarrays
☆15Oct 26, 2026Updated this week
Alternatives and similar repositories for napari-prism
Users that are interested in napari-prism are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 7 months ago
- AnnNet (Annotated Network) is a unified, high-expressivity graph platform designed to bring the convenience of AnnData-style annotated co…☆25Oct 11, 2026Updated 2 weeks ago
- Analysis framework for morphological profiling data☆14Updated this week
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Updated this week
- Facilitating the use of Deep Visual Proteomics☆23Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Agentic plugins to annotate SDRF using Claude; Codex; Cursor; Gemini☆19Updated this week
- A toolkit to test, validate, and improve agentic skills.☆18Updated this week
- Public landing page and releases for CellTune.☆12Jul 13, 2026Updated 3 months ago
- Configure Vitessce using existing Scverse plotting APIs☆25Aug 7, 2026Updated 2 months ago
- ☆12Dec 19, 2022Updated 3 years ago
- Single-cell morphological analysis☆16Apr 23, 2026Updated 6 months ago
- Build contrasts for models defined with formulaic☆13Updated this week
- ☆10May 31, 2022Updated 4 years ago
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentia…☆17Jan 11, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Read, create and write cutting data for the Leica LMD6 & LMD7 microscope. Build reproducible workflows to calibrate, import SVG files and…☆16Oct 16, 2026Updated 2 weeks ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆43Updated this week
- A multimodal, agentic AI framework that captures and shares practical expertise by linking written instructions to real-world laboratory …☆25Dec 2, 2025Updated 10 months ago
- Tools and scripts for EASI-FISH image data analysis☆17Jul 24, 2026Updated 3 months ago
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- Holy Bio MCP - Bringing together all your favorite agentic biotools under the same framework☆20Jul 14, 2025Updated last year
- UniFORM: Towards Universal ImmunoFluorescence Normalization for Multiplex Tissue Imaging☆19Aug 25, 2026Updated 2 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆13Sep 21, 2023Updated 3 years ago
- Interactive visualization of spatial omics data☆91Sep 8, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effe…☆48Jul 8, 2026Updated 3 months ago
- An AnnData-based framework for integrated proteomics analysis☆30Updated this week
- An R Package for general purpose TIFF file I/O which plays nice with ImageJ☆16Jul 6, 2026Updated 3 months ago
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Jan 2, 2023Updated 3 years ago
- ☆20Updated this week
- Aggressively de-bloat your AI generated codebase with the skill that makes lines of code (SLOC) a true north star for *actually* simplify…☆15Jun 1, 2026Updated 5 months ago
- Infrastructure of AlphaX ecosystem☆60Updated this week
- ☆10Oct 31, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A python package for Multiomics and Ecological Spatial Analysis (MESA)☆24Sep 30, 2026Updated last month
- A library for interfacing with SpatialData stores in TS/JS☆11Updated this week
- BioContextAI Knowledgebase MCP server for biomedical agentic AI☆31Oct 12, 2026Updated 2 weeks ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆56Updated this week
- ☆77Nov 18, 2024Updated last year
- SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of…☆16Updated this week
- ☆20Sep 19, 2025Updated last year