Interactive and integrated analysis of multiplexed tissue microarrays
☆15Jul 13, 2026Updated last week
Alternatives and similar repositories for napari-prism
Users that are interested in napari-prism are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Facilitating the use of Deep Visual Proteomics☆17Jan 16, 2026Updated 6 months ago
- A Python package for unsupervised analysis of spatial (prote)omics data.☆17Updated this week
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 3 months ago
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentia…☆16Jan 11, 2024Updated 2 years ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆25Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Configure Vitessce using existing Scverse plotting APIs☆25Updated this week
- ☆10May 31, 2022Updated 4 years ago
- Read, create and write cutting data for the Leica LMD6 & LMD7 microscope. Build reproducible workflows to calibrate, import SVG files and…☆16Updated this week
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- Interactive visualization of spatial omics data☆87Jul 2, 2026Updated 2 weeks ago
- A multimodal, agentic AI framework that captures and shares practical expertise by linking written instructions to real-world laboratory …☆22Dec 2, 2025Updated 7 months ago
- Tools and scripts for EASI-FISH image data analysis☆17Oct 19, 2022Updated 3 years ago
- Holy Bio MCP - Bringing together all your favorite agentic biotools under the same framework☆18Jul 14, 2025Updated last year
- Infrastructure of AlphaX ecosystem☆56Jun 16, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- UniFORM: Towards Universal ImmunoFluorescence Normalization for Multiplex Tissue Imaging☆18Jul 30, 2025Updated 11 months ago
- An AnnData-based framework for integrated proteomics analysis☆28Jul 8, 2026Updated last week
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆45Jun 11, 2026Updated last month
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆13Sep 21, 2023Updated 2 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- An R Package for general purpose TIFF file I/O which plays nice with ImageJ☆17Jul 6, 2026Updated 2 weeks ago
- ☆18May 15, 2026Updated 2 months ago
- ☆10Oct 31, 2023Updated 2 years ago
- BioContextAI Knowledgebase MCP server for biomedical agentic AI☆28Jan 12, 2026Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Jan 2, 2023Updated 3 years ago
- A python package for Multiomics and Ecological Spatial Analysis (MESA)☆25Apr 8, 2025Updated last year
- ☆74Nov 18, 2024Updated last year
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Jun 12, 2026Updated last month
- Static plotting for spatialdata☆82Jul 10, 2026Updated last week
- Segment Anything for Histopathology☆69Jun 6, 2026Updated last month
- Efficient data structures and IO for whole slide image analysis☆27Jun 20, 2026Updated last month
- Single-cell spatial omics analysis that makes you happy!☆70Jul 13, 2026Updated last week
- Deploy Dask on Marathon☆10Feb 6, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GPU-accelerated Image Processing library for Python☆62Jul 8, 2026Updated last week
- Access public biological ontologies.☆14Aug 7, 2024Updated last year
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆26Dec 5, 2024Updated last year
- ☆20Sep 19, 2025Updated 10 months ago
- 🔬 MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Pe…☆37Mar 25, 2026Updated 3 months ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Jul 3, 2026Updated 2 weeks ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆44Jul 10, 2026Updated last week