walterlab-HMS / SPOCLinks
Code repository for the SPOC tool for scoring binary AF-M predicitons.
☆14Updated 7 months ago
Alternatives and similar repositories for SPOC
Users that are interested in SPOC are comparing it to the libraries listed below
Sorting:
- Long disorder consensus predictor☆17Updated 3 months ago
- ColabFold protocol☆57Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Geometry-aware protein binding site predictor☆25Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆32Updated 2 years ago
- ☆47Updated 3 weeks ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- ☆23Updated 2 years ago
- Evolutionary conservation estimation of residues or nucleotides☆54Updated 3 years ago
- Fragment binding prediction with ColabFold☆38Updated 3 weeks ago
- Cross-protein transfer learning for variant effect prediction☆20Updated 2 years ago
- ☆11Updated last year
- ☆25Updated last year
- MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline☆26Updated this week
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…☆17Updated 10 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- ☆28Updated 11 months ago
- ☆31Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- Antibody-Specific Epitope Mapping☆14Updated 2 months ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 7 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Fast protein domain structure embedding+search tool☆27Updated 2 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 8 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 3 months ago
- Fast and accurate protein structure prediction☆56Updated 10 months ago
- Detection of remote homology by comparison of protein language model representations☆57Updated 11 months ago
- a collection of colabs useful for molecular biology☆31Updated last year