amarinderthind / RNA-seq-tutorial-for-gene-differential-expression-analysisLinks
This RNAseq data analysis tutorial is created for educational purpose
☆32Updated 3 weeks ago
Alternatives and similar repositories for RNA-seq-tutorial-for-gene-differential-expression-analysis
Users that are interested in RNA-seq-tutorial-for-gene-differential-expression-analysis are comparing it to the libraries listed below
Sorting:
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- A list of alternative splicing analysis resources☆46Updated 7 months ago
- ☆50Updated 4 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 3 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆80Updated 4 years ago
- ☆59Updated 3 months ago
- Tutorial Website☆60Updated 4 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆118Updated 3 weeks ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated last week
- A continually expanding collection of RNA-seq tools☆52Updated 3 weeks ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆29Updated 8 months ago
- Workshop • Analysis of RNA-seq data☆36Updated last year
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 8 months ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Publication quality NGS track plotting☆114Updated 2 weeks ago
- ☆47Updated 2 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- ☆63Updated last month
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated last week
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆78Updated 4 months ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated last week
- Estimate locus specific human LINE-1 expression.☆39Updated last month
- fork of RSeQC python RNAseq metrics suit of tools☆49Updated 6 years ago