Shiny app for geno-pheno catalog
☆11Nov 1, 2026Updated this week
Alternatives and similar repositories for GenoPheno-CatalogShiny
Users that are interested in GenoPheno-CatalogShiny are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Updated this week
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆19Dec 28, 2022Updated 3 years ago
- ☆10Oct 18, 2021Updated 5 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆12Sep 28, 2026Updated last month
- Human mitochondrial variants annotation using HmtVar.☆18Oct 16, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Differential Mutation Analysis☆11May 24, 2020Updated 6 years ago
- Code to calculate regional missense constraint☆13Sep 22, 2026Updated last month
- Workshop for Machine Learning in pharmacogenomics☆11Jul 8, 2019Updated 7 years ago
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- Tutorial on survival modeling with omics data☆12May 6, 2026Updated 6 months ago
- Transcript specific RNA splicing events lookup☆10Jun 22, 2026Updated 4 months ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- UMCU Genetics Nextflow modules☆30Oct 25, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- High performance WebGL genome visualization☆16Oct 22, 2021Updated 5 years ago
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆20May 31, 2024Updated 2 years ago
- An R package for Standardized Summary, Annotation, Comparison, and Visualization of CNV, CNVR and ROH☆16Oct 17, 2021Updated 5 years ago
- Example R scripts to run burden and association analysis on array CNV data☆14Nov 9, 2016Updated 9 years ago
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- Realtime base modification frequency tool☆15Sep 16, 2025Updated last year
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 6 years ago
- Calls somatic SNVs, indels, and allelic copy number jointly across multiple samples from the same patient. These can be standard tumor/n…☆10Oct 29, 2020Updated 6 years ago
- R package for InterMine☆18Apr 5, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆22Nov 20, 2022Updated 3 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed☆19Jun 19, 2020Updated 6 years ago
- ☆16Jul 9, 2026Updated 3 months ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 11 months ago
- ☆16Jan 5, 2018Updated 8 years ago
- ☆33Nov 6, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Apr 25, 2024Updated 2 years ago
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 5 years ago
- PGxPOP☆18Jan 25, 2023Updated 3 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Jan 28, 2022Updated 4 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Liftover VCF files☆19Dec 10, 2016Updated 9 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago